Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02978 ATGGCGGGAGAGGAGCCGCGCAAGCAAAGCCCATCTTTGTGCTCGTATTCTGCTACTACTTCTCCTTCTCCTTGTCTTCCAGGGATAAAGGATGATCCGAACCAAAAATGCTGGAGGAAGCAAGCGGACGAGAATCTCAAGAGGCTTCACTCTCTTCTCTTCGGGGCCGATCTTGCCCTTCAGAAAGATGATTTTGAGTCGGCGTACATCCTTGGGCTTCGCCTCATCGGCTTTCTCGACTCTCGCTGCCACTCCGATGTCGATGAAGCTTATATACGTCCAATTCGACATGAAGTCTTGGGGAAAATTGACACCGCTCGTCGATCCCTCATTCCCGACTCTGATCGCCAAGCGTTTGGACAAGCAAAAAAGTCTGCAGGTCGTATTTTTGGCAAAACAGGAGATATTGACATTGGGAAGATTAAGAAGTCGAAGTACTTCCAAGCTCTTGTCAAGGACTCCAAAGAAAAGGGTTATCATCTGGAGAAGCAAGACAAAGCGGGAAGTAAATTGCCAAAAGAATCGTTGCAAACCAAGTTAACATCGATGTATGGGAGAAGTACATTGAAGGCTAATAGTAGTTCCAAATTGAGCTTCAAACATAATAGATCTGAGGACTGCATGATTGTTGAAAAGCCTATGTCACATGGTGGCCACAGTAAGGGTCATCCTGTCTCTTCCTTCTTGAAAACTGAAGGGGATGAAAGAACTTTTGGAACTTTGGGGAAAAAGCGTTTGCACTTGGAAACTAATAACCCCCAAGTTAGCAACGTGAAGTCACCTTCAAGCAATGAGGAGGCGAAGTCTGATTTTGTTACTGCCAGAGCTAAATTGGAAATGGAAACAAGGCAGAGGCGAGAAGGGATTGGTTCACCCACAGCATCTGTCTCACAATATGATATCAATACTTCGAATCGGGTATATGGTGGGAGATCATATGGTGTTTCTCGACGTGGCGTCCGTGGTAATTTTGTGCCTCCTATTAAATCCAATGGAACTGGCGATGGAAATATGACGTCAAGAATTTCTGGAAAGTGTGATGATACTTTAGATGACTCAACAAAGAGATGTTTGGAAGGGCTATGTGGTCCTGACGGAGAGCTTCCTGAGAAATTGAGGAATATAGAACCACGCCTTATTGAACATATTAGCAATGAGATTATGGATAGAGATCCTAATGTCCGCTGGGATGACATTGCGGGATTGGAACATGCAAAGAAATGTGTCACTGAGATGGTCATATGGCCTCTGCTACGACCTGATATATTCAAGGGATGCCGCTCTCCTGGGCGAGGTCTACTTTTATTTGGTCCACCAGGAACTGGTAAAACAATGATAGGAAAAGCCATAGCAGGGGAGGCAAAGGCAACCTTCTTTTACATCTCGGCCAGTTCATTGACAAGCAAGTGGATCGGAGAAGGTGAAAAACTAGTGAGAGCACTCTTTGGAGTTGCCAGTTGTCGCCAGCCGGCTGTAATATTTGTGGATGAAATAGATTCTCTCCTATCTCAGCGTAAGTCAGAGGGTGAACACGAGTCAAGCAGAAGGCTAAAGACACAATTTCTCATTGAAATGGAAGGTTTTGACAGTGGTAACGAGCAGGTTCTTCTTATAGGGGCCACCAACCGTCCTCAAGAGCTTGATGAGGCAGCACGAAGGCGACTTACCAAAAGACTATATATCCCCCTGCCATCCTCAGAGGCAAGAGCCTGGATTATACGTAACCTCCTGGACAAGGACGGACTATTCATGCTTACAAAGGAAGAGATTGATACCATATGCGACAAAACGGAAGGATATTCGGGATCAGACATGAAAAATTTAGTGAAGGATGCTTCAATGGGTCCCCTAAGAGAGGCTTTAAAGCAGGGCATAGAAATTACCAAGTTGAACAAGGAAGATATGCGGCCCGTAGCTCTTCAGGACTTTATGGACGCTCTAAAAGAGGTGAGGCGATCTGTTTCCTCAAATGAACTGGGCGCTTATGAAAAATGGAACGAACAATTTGGAAGCCTATCATCGGAGAAGCTGGAGTCATTTGTATGA 2046 0.4526 MAGEEPRKQSPSLCSYSATTSPSPCLPGIKDDPNQKCWRKQADENLKRLHSLLFGADLALQKDDFESAYILGLRLIGFLDSRCHSDVDEAYIRPIRHEVLGKIDTARRSLIPDSDRQAFGQAKKSAGRIFGKTGDIDIGKIKKSKYFQALVKDSKEKGYHLEKQDKAGSKLPKESLQTKLTSMYGRSTLKANSSSKLSFKHNRSEDCMIVEKPMSHGGHSKGHPVSSFLKTEGDERTFGTLGKKRLHLETNNPQVSNVKSPSSNEEAKSDFVTARAKLEMETRQRREGIGSPTASVSQYDINTSNRVYGGRSYGVSRRGVRGNFVPPIKSNGTGDGNMTSRISGKCDDTLDDSTKRCLEGLCGPDGELPEKLRNIEPRLIEHISNEIMDRDPNVRWDDIAGLEHAKKCVTEMVIWPLLRPDIFKGCRSPGRGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSEGEHESSRRLKTQFLIEMEGFDSGNEQVLLIGATNRPQELDEAARRRLTKRLYIPLPSSEARAWIIRNLLDKDGLFMLTKEEIDTICDKTEGYSGSDMKNLVKDASMGPLREALKQGIEITKLNKEDMRPVALQDFMDALKEVRRSVSSNELGAYEKWNEQFGSLSSEKLESFV 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02978 681 Pfam AAA+ lid domain 590 626 IPR041569 -
Accr2g02978 681 SMART AAA_5 429 565 IPR003593 GO:0016887
Accr2g02978 681 Gene3D - 564 650 - -
Accr2g02978 681 MobiDBLite consensus disorder prediction 10 24 - -
Accr2g02978 681 FunFam Fidgetin-like 1 392 574 - -
Accr2g02978 681 Pfam Vps4 C terminal oligomerisation domain 636 670 IPR015415 -
Accr2g02978 681 MobiDBLite consensus disorder prediction 1 26 - -
Accr2g02978 681 Pfam ATPase family associated with various cellular activities (AAA) 433 563 IPR003959 GO:0005524|GO:0016887
Accr2g02978 681 Gene3D - 392 666 IPR027417 -
Accr2g02978 681 FunFam Fidgetin like 1 564 650 - -
Accr2g02978 681 ProSitePatterns AAA-protein family signature. 535 554 IPR003960 GO:0005524|GO:0016887
Accr2g02978 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 392 669 IPR027417 -
Accr2g02978 681 PANTHER AAA DOMAIN-CONTAINING 193 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02978 Accr-Chr2 65635588 65641030 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02978 348 672 Calmodulin-binding Proteins AT3G56690 31.845 1.53e-40 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02978 K22766 - qsa:O6P43_004816 952.97