Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02961 ATGGACTGGGACTGGAAAGATTTGGCGTGGGATCCATCCGGGTCGGAGTTATCAAATGGAGCGGCTTCAGTGGATTTGAGTCTTGGAGAGATTTCCGATTTCATACAAAAATCAACCTCAAATACGCCTAAGGACTTACCGAGAGACTCGAAATCGGCACAATCGCCAAGTGGTTCGTCAAAGAGGAGCCGTACACTAAATGGATCGACTCAAAGTGTGTCGTGCTCGGTGGATGGGTGCGACTCCGACCTGAGTGATTGCAGAGAGTATCATCGGCGACACAGAGTGTGTGAGAAGCACTCCAAGACGCCCATTGTGCTGATAGGGGGAAAGCAGCAGCGGTTCTGCCAGCAATGCAGCAGATTTCATTCTCTGGGTGAGTTCGATGAAGTTAAGAGGAGTTGCAGAAAACGGCTTGATGGACATAACAAGCGCAGAAGGAAGCCTCAGCCGCCTTCTCTTTTCATGGCTGCTGAGAAATTCCTGAGCGGCTACAAAGGACCCAGAATCCTTCATTTTGGTAGTCCTCAGATGTACGACAACCCGTTTGTGAGAAGTATGTGGCCTGCCACTGCCAAAGCTGTAGCTGAACCAGTGATGATCAGTTATGACCAAAACAGTCTGCTAAGTTCCTTTGCTAATGTAGAGCATCAGCAGGACAAGCAACTTCCTCTATTTGGGTTTAACAGCTCTAAAGAAGGCCATTGTGATGAGGCTGTGTCTGGAATTCCCATGAGACAAGCAACTTCTGGTTCCATTGGCCCATCAGCGAGTGCAAATGGTGGTCGGAAGCTCGCTTCTGATTTCAAACCTGGATCTTTTGATTCAAATTGTGCTCTCTATCTTCTGTCAACACTTCAGACACAAAGTCAAGAGTTAAGCTTGGTGCAGTCCACCGTGAACTGTCCGGTGCAATCATCTCCCTTAGAAGATTTGCATTTTGATGCTGGGGACAAGTACTCATCATGCTCAGAAAGTCCACAAGAGAAGTCTACTAATCCATTATTGGTTGTGGATGCCGACAGGACTAACCTCCATTCCGACCGTATGATTCACATGAGGCCTGACGAAATTGTGGAAAATGGGGACTTGGCTACCTTACCATTTTTCTGGGAGTAG 1119 0.4772 MDWDWKDLAWDPSGSELSNGAASVDLSLGEISDFIQKSTSNTPKDLPRDSKSAQSPSGSSKRSRTLNGSTQSVSCSVDGCDSDLSDCREYHRRHRVCEKHSKTPIVLIGGKQQRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNKRRRKPQPPSLFMAAEKFLSGYKGPRILHFGSPQMYDNPFVRSMWPATAKAVAEPVMISYDQNSLLSSFANVEHQQDKQLPLFGFNSSKEGHCDEAVSGIPMRQATSGSIGPSASANGGRKLASDFKPGSFDSNCALYLLSTLQTQSQELSLVQSTVNCPVQSSPLEDLHFDAGDKYSSCSESPQEKSTNPLLVVDADRTNLHSDRMIHMRPDEIVENGDLATLPFFWE 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02961 372 MobiDBLite consensus disorder prediction 37 79 - -
Accr2g02961 372 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 25 309 IPR044817 GO:0003677
Accr2g02961 372 SUPERFAMILY SBT domain 73 154 IPR036893 GO:0003677|GO:0005634
Accr2g02961 372 ProSiteProfiles Zinc finger SBP-type profile. 72 149 IPR004333 GO:0003677
Accr2g02961 372 FunFam Squamosa promoter-binding-like protein 14 66 136 - -
Accr2g02961 372 MobiDBLite consensus disorder prediction 37 80 - -
Accr2g02961 372 Gene3D - 66 136 IPR036893 GO:0003677|GO:0005634
Accr2g02961 372 Pfam SBP domain 75 148 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02961 Accr-Chr2 65507625 65509406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02961 68 173 SBP-box Gene Family AT5G50670 65.094 5.27e-45 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Accr2g02961 SBP 9.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02961 - - lja:Lj1g3v3847150.1 415.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02961 2 65507625 65509406 Accr2g02961 2 65507625 65509406 ECH