Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02960 ATGGAGACCTACCCTGTGTTATTTCCTTGCCCCGATCCTTCAACTTATTCAGTTTCTACTAGTGCCATGGGAGACTCTCACCTGCTTCGCGGTCTTAGCAATAACATGGAGGTGAGTCAGCACATTAATAACACTAGTGGCTTCCTGGGTTTGAGGCAGGCTGCTGAGAGTGACGATCAGTCGCACAGAGTGAGAGGATGTGAAAGCCTATCGAGGAATAGTAAGGATGAGCAGCAAGGTGGTTCTGGGAAGAAGAAGGGTGAGAAGAAGGCGCGAAAGCCTAGATATGCTTTTCAGACAAGGAGTCAGGTTGATATACTCGATGATGGCTATCGGTGGAGAAAATATGGCCAGAAAGCTGTCAAAAACAACAAATTCCCAAGGAGCTACTATAGGTGTACAAATCAAGGGTGCAATGTGAAGAAGCAAGTGCAACGGCTAACCAAAGACGAGGGAGTGGTGGTGACCACATACGAGGGAGTTCACAACCATGCCATAGAGAAGACCAACGACAACTTTGAACACATTTTGAGTCAGATGCAAATATACACTCCCTTTTAA 561 0.4635 METYPVLFPCPDPSTYSVSTSAMGDSHLLRGLSNNMEVSQHINNTSGFLGLRQAAESDDQSHRVRGCESLSRNSKDEQQGGSGKKKGEKKARKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTNQGCNVKKQVQRLTKDEGVVVTTYEGVHNHAIEKTNDNFEHILSQMQIYTPF 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02960 186 ProSiteProfiles WRKY domain profile. 102 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr2g02960 186 MobiDBLite consensus disorder prediction 56 85 - -
Accr2g02960 186 MobiDBLite consensus disorder prediction 54 97 - -
Accr2g02960 186 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 46 170 IPR044810 GO:0003700
Accr2g02960 186 SMART WRKY_cls 107 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr2g02960 186 Pfam WRKY DNA -binding domain 108 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr2g02960 186 FunFam WRKY transcription factor 57 93 167 - -
Accr2g02960 186 SUPERFAMILY WRKY DNA-binding domain 99 166 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr2g02960 186 Gene3D WRKY domain 91 166 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02960 Accr-Chr2 65490749 65491810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02960 95 186 WRKY Transcription Factor Family AT5G13080 85.870 3.24e-56 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr2g02960 WRKY 8.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02960 - - pvu:PHAVU_001G088200g 234.187