Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02956 ATGGATCCCAAGGGCTCAAAGCAATCGCAGGAGGTGCCCAACTTCTTGAGTCTCCCACAGCCACAAGCCAACATCATGGGAGAGAACAAGCCCGCAGAAATCAAGGATTTCCAGATTGCGATAGCCGATAAAGAAGACAATAACAAGAAGCAGTTAGCCCCCAAGAGGAGCTCCAACAAAGACAGACACACCAAAGTTGAAGGCAGAGGAAGGAGGATAAGGATGCCCGCTCTCTGTGCCGCCAGAATCTTCCAGTTGACCAGAGAGTTGGGTCACAAATCTGACGGCGAGACCATTCAGTGGCTTCTCCAGCAGGCGGAGCCGTCGATCATCGCCGCCACAGGAAGCGGCACGATTCCGGCGTCAGCTTTAGCTGCAGCGGGTGGCTCTGTTTCACAACAGGGGACTTCTCTGTCTGCAGGGTTGCATCAGAAAATGGATGAGTATGGGGGGTCCAATATTGGGTCGGGCAGTAGGACCGGGTGGGCTATGGTGGGCGGAAATCTGGGGAGACCCCATATGGCTACGGGTCTATGGCCCCCAGTTAGTGGGTTCGGGTTTCAGTCATCATCGGGTCCATCCACACCAAGTCTTGGAAGCGAGAGTTCAAATTACCTGCAAAAGATTGGCTTCCCTGGCTTTGACTTGCCTGCTGCAGCCACCAACATGGGTGGCATGAGTTTTACCTCAATTTTGGGTGGCACTAACCAGCAAATGCCTGGCTTGGAGCTTGGTTTGTCTCAAGATGGTCACATCGGTGTTATTAACCCACAAGCCTTGTCCCAGATTTATCAGCAGATGGGTCAGGCTAGAGTACACCAGCAGCAGCAGAATCAGCATCAGCATCAGCAGCCTCCTTCTAAGGAAGATTCTCAAGGTTCTGGACAGTGA 891 0.5286 MDPKGSKQSQEVPNFLSLPQPQANIMGENKPAEIKDFQIAIADKEDNNKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASALAAAGGSVSQQGTSLSAGLHQKMDEYGGSNIGSGSRTGWAMVGGNLGRPHMATGLWPPVSGFGFQSSSGPSTPSLGSESSNYLQKIGFPGFDLPAAATNMGGMSFTSILGGTNQQMPGLELGLSQDGHIGVINPQALSQIYQQMGQARVHQQQQNQHQHQQPPSKEDSQGSGQ 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02956 296 Pfam TCP family transcription factor 58 148 IPR017887 -
Accr2g02956 296 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 30 253 IPR005333 GO:0003700
Accr2g02956 296 MobiDBLite consensus disorder prediction 266 296 - -
Accr2g02956 296 MobiDBLite consensus disorder prediction 7 24 - -
Accr2g02956 296 MobiDBLite consensus disorder prediction 42 68 - -
Accr2g02956 296 ProSiteProfiles TCP domain profile. 59 113 IPR017887 -
Accr2g02956 296 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02956 Accr-Chr2 65427108 65427998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02956 1 296 TCP Transcription Factor Family AT3G27010 56.442 5.89e-92 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Accr2g02956 TCP 5.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02956 - - vvi:100253170 473.781