Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02930 ATGGGAGAGTCGGGAGGCATGTACCAGTACGAGCTGCTCAACCAGTCCTCGGCCTCCCCCAGGAGCCTCCGCAGGCCGTCGTCCTCACAGCCTTCTTCCCCTCGCATTTTTCAGTGCCGTTACTGCCCTCGCAAGTTCTGCACCTCCCAGGCACTCGGAGGCCACCAGAACGCCCACAAGCGCGAGAGAGCCGCCGACCGCAACCTTACCCCCACCGCCCTTCCCTCTCCCCAGCCTCACCTCCTCCCCTCCCGCTTCTTCGACCCCTACTGGCTCCATGTTGACCCCATTCATCACTTCGCCCACCACCCTCCTCCCCCTCCCTCCAAGCCTTCTGATCCTCTCGTCGACCACGTCAACCATCTCGACCTCGACCTCACCCTTCGCCTGTGA 393 0.6361 MGESGGMYQYELLNQSSASPRSLRRPSSSQPSSPRIFQCRYCPRKFCTSQALGGHQNAHKRERAADRNLTPTALPSPQPHLLPSRFFDPYWLHVDPIHHFAHHPPPPPSKPSDPLVDHVNHLDLDLTLRL 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02930 130 ProSiteProfiles Zinc finger C2H2 type domain profile. 37 64 IPR013087 -
Accr2g02930 130 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 16 68 IPR044246 GO:0009788
Accr2g02930 130 MobiDBLite consensus disorder prediction 1 36 - -
Accr2g02930 130 MobiDBLite consensus disorder prediction 52 81 - -
Accr2g02930 130 ProSitePatterns Zinc finger C2H2 type domain signature. 39 59 IPR013087 -
Accr2g02930 130 Gene3D Classic Zinc Finger 14 77 - -
Accr2g02930 130 MobiDBLite consensus disorder prediction 9 36 - -
Accr2g02930 130 SUPERFAMILY beta-beta-alpha zinc fingers 34 64 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02930 Accr-Chr2 65191623 65192015 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02930 29 67 C2H2 Transcription Factor Family AT5G14010 76.923 4.88e-15 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr2g02930 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02930 - - pcin:129307163 135.191