Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02907 ATGTCTCAGGCTCACACATCACCATCTGATCAGACCCAAAAGGAGGAAGAGACTTCACCTTCTTCTACTTTTTCGTACCTTATCAGCACCAGTACTGATACTAAAATCTCACATGGTCAAGTAATAAGCACTTCTTCTGGGCTGATCCAGAACCAGGACCCATCTCAGCCTACACATCAAAATCAAGGCAACAATAATAATATGAGAAAAAGGAGCTACAGAGGAGTAAGGCAGAGACCCTGGGGAAAATGGGCAGCCGAAATCCGAGACCCTCAAAAAGCAGCCAGAGTGTGGCTTGGCACCTTCGAGACCGCTGAGGATGCAGCCGCTGCTTATGATGCTGCTGCTTTAAGGTTCCGAGGAAGCAAAGCTAAGCTTAATTTCCCCGAACGTGTTTCTTTAGCTGCTTCTTCAGCCATCCCTCCGTCGCAAACCCAGCTTCCGGCTGCTCCTTCCACAGCGGCACAAACGGTGTCTCGGCCTCCAGCGCCGTCGACCGACGAAGGGTTCCCGAATCTATTGCAGTACGCGCAGCTGCTTCGTGGTGGTGGTGATGATGACCTGCAAAGAGCTGCTTCGGGACTTTATAGTTATCAGAATGAGTCATTATTTCTTTGTGATTCTTCTTCTCCGTTGTTCTCGTCATCATCAGGATTGTCTTCTTCGTCTGCTTCTATATCTGGGTCTGATCAACAACAGGTTCAAGATCCCCAGACAGCACAAAAGGGAGATTATAGTTCTTCTTCTTCTGGTTCTTATTTTTTTGATGGAGGAAACACGAGGGGATGA 789 0.4804 MSQAHTSPSDQTQKEEETSPSSTFSYLISTSTDTKISHGQVISTSSGLIQNQDPSQPTHQNQGNNNNMRKRSYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEDAAAAYDAAALRFRGSKAKLNFPERVSLAASSAIPPSQTQLPAAPSTAAQTVSRPPAPSTDEGFPNLLQYAQLLRGGGDDDLQRAASGLYSYQNESLFLCDSSSPLFSSSSGLSSSSASISGSDQQQVQDPQTAQKGDYSSSSSGSYFFDGGNTRG 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02907 262 ProSiteProfiles AP2/ERF domain profile. 72 129 IPR001471 GO:0003700|GO:0006355
Accr2g02907 262 MobiDBLite consensus disorder prediction 1 79 - -
Accr2g02907 262 CDD AP2 73 130 IPR001471 GO:0003700|GO:0006355
Accr2g02907 262 Gene3D AP2/ERF domain 71 131 IPR036955 GO:0003700|GO:0006355
Accr2g02907 262 MobiDBLite consensus disorder prediction 137 170 - -
Accr2g02907 262 MobiDBLite consensus disorder prediction 1 71 - -
Accr2g02907 262 MobiDBLite consensus disorder prediction 137 163 - -
Accr2g02907 262 PRINTS Ethylene responsive element binding protein signature 95 111 IPR001471 GO:0003700|GO:0006355
Accr2g02907 262 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Accr2g02907 262 SUPERFAMILY DNA-binding domain 73 130 IPR016177 GO:0003677
Accr2g02907 262 Pfam AP2 domain 73 121 IPR001471 GO:0003700|GO:0006355
Accr2g02907 262 FunFam Ethylene-responsive transcription factor 2 71 130 - -
Accr2g02907 262 SMART rav1_2 72 135 IPR001471 GO:0003700|GO:0006355
Accr2g02907 262 MobiDBLite consensus disorder prediction 211 262 - -
Accr2g02907 262 PANTHER DNA-BINDING DOMAIN 22 229 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02907 Accr-Chr2 64939030 64940364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02907 52 148 AP2-EREBP Transcription Factor Family AT5G61890 71.000 9.25e-43 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr2g02907 AP2 3.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02907 - - var:108318772 173.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02907 2 64939030 64940364 Accr2g02907 2 64939030 64940364 ECH
Accr8g00415 8 6426424 6428286 Accr2g02907 2 64939030 64940364 ECH