Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02894 ATGAACACATCAAATTCGTCATCGCCTTCCAAGGCGAAAAGGAAGCAAACGGCAACAACAAGCGCCAAAACAGTACCAGAGCAACAACATGGAGCGGCGTGGGGAGGAAGGTACCTGGGTGTTCGGAGAAGGCCGTGGGGAAGATACGCCGCGGAGATCAGAGACCCGTCGACCAAAGAGAGGCATTGGCTCGGCACCTTCGACACTGCTGAGGAAGCTGCCTTAGCCTACGACAGAGCAGCACGCTCCATGCGAGGCCCTCGCGCTCGAACCAACTTCGTATACTCAGATACTCCTCCCGGCTCCTCCGTAACTCCCATTATCTCCCCTGACGAGGAATCCCACCAGAACCACGACTTCTCGTCTCTCTTGGCTTCGAACTTGCTCGCTCAACAACCCAACCCTACTGATCGGCCGACGGAGAGCGCCCTCTCGGGCGGGTTCTTGGGCCTAAAGGATGCTGACGCTGGTGGCTGGGCAGTTTCATCGGGGATTTATTCCCAGCAATATCAATCCCCCACCACGATGGACGTGCATAACGTGCCCCATTTCCGCCAATTGTATGATGATAGCAACACTGAACTCCCGCCATTGCCACCGGATATTACGAGCTCCTTAGGTTACGAAATGGGCCATGAGTTTACCAATAATGGATTTGGATATTCGGAGCAAAGCACAGGAACGGGATTTGAGGCATTAACGAGCTGGCCTTCGTGCTCGTATACGGGCTTGGATTCGGTTGATTACAAGCATAGCCCACTTTTGAGCACAGTGCCAAAGGTGTCAGAAAAGATGCCCGAAGGTTTTGAATTGGGAGGTTCCTCCTATACTTTCTTCTGA 840 0.5345 MNTSNSSSPSKAKRKQTATTSAKTVPEQQHGAAWGGRYLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSMRGPRARTNFVYSDTPPGSSVTPIISPDEESHQNHDFSSLLASNLLAQQPNPTDRPTESALSGGFLGLKDADAGGWAVSSGIYSQQYQSPTTMDVHNVPHFRQLYDDSNTELPPLPPDITSSLGYEMGHEFTNNGFGYSEQSTGTGFEALTSWPSCSYTGLDSVDYKHSPLLSTVPKVSEKMPEGFELGGSSYTFF 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02894 279 MobiDBLite consensus disorder prediction 1 37 - -
Accr2g02894 279 MobiDBLite consensus disorder prediction 1 27 - -
Accr2g02894 279 SMART rav1_2 37 100 IPR001471 GO:0003700|GO:0006355
Accr2g02894 279 Pfam AP2 domain 38 86 IPR001471 GO:0003700|GO:0006355
Accr2g02894 279 Gene3D AP2/ERF domain 36 95 IPR036955 GO:0003700|GO:0006355
Accr2g02894 279 SUPERFAMILY DNA-binding domain 37 95 IPR016177 GO:0003677
Accr2g02894 279 MobiDBLite consensus disorder prediction 95 111 - -
Accr2g02894 279 PRINTS Ethylene responsive element binding protein signature 38 49 IPR001471 GO:0003700|GO:0006355
Accr2g02894 279 PRINTS Ethylene responsive element binding protein signature 60 76 IPR001471 GO:0003700|GO:0006355
Accr2g02894 279 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 14 152 - -
Accr2g02894 279 CDD AP2 37 93 IPR001471 GO:0003700|GO:0006355
Accr2g02894 279 FunFam Ethylene-responsive transcription factor 2 37 95 - -
Accr2g02894 279 ProSiteProfiles AP2/ERF domain profile. 37 94 IPR001471 GO:0003700|GO:0006355
Accr2g02894 279 MobiDBLite consensus disorder prediction 91 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02894 Accr-Chr2 64841135 64841974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02894 19 274 AP2-EREBP Transcription Factor Family AT5G13910 42.264 2.99e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr2g02894 AP2 1.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02894 K09286 - qsa:O6P43_009772 283.493