Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02870 ATGAAACCTCCCCATTCCAATCTCCCTCCTGGTTTCAGGTTTCACCCCACCGACCATGAACTCATCCTTCACTATCTCAGCAAGAAGGTTGCTTCTTTGCCCCTCCCCGTCTCTGTCATTGCCGACGTCGACATCTACAAGTTCGATCCTTGGGACTTACCAGGAGAGGCGGCGTTTGGAGAGAGAGAATGGTACTTCTTCAGTCCGAGGGACCGAAAGTACCCCAATGGAGCGAGGCCAAACAGGGCGGCTGTTTCTGGGTATTGGAAGGCCACTGGCACAGACAAGCACATCGTTCCCCCATCACAGCCTGCTTCAGCACGGCACGCCATTGGTGTAAAGAAAGCTCTCGTTTTCTACAAAGGAAAGCCCCCAAAAGGCATCAAGACCAATTGGATCATGCACGAATATCGCCTCGGTCACTCCAACACCAAACCCATTAAGCTCAGAGACACCTCCATGAGGCTGGATGATTGGGTTTTGTGCCGGATATACCACAGGTCTAAGCACGACACGTCATCGTCATCTACCCCAGAGGCTCTGGTCACGGTGGCTGATCAAGCACAGGATCAGCAGCAGCTTCTCAAGCAAGCTCTTTTGCCGGCATCAACCAGCAGCACCATGAATCCCCATGTTCCTCCACATACCACCACGCTGGCGTCGAACAAGTCTTTCTCCAATCTGTTAGATGCCATGGACTACTCTATGTTGAGCAGCTTCTTGTCTGATCAGAGCCATTCCGGCCCCACTGCTCCGGCTTCTGTTACTGGTGCCACCGGCGGCAATATTATGGATCACCACTTGACTGTGCCTTCAGCCCCAAACATGGAAAACGGCAGGTCCAAACGACAGCTTCCTGACGTGGACGAGGAAACCTTGTACGCATCCAAGAAATTCCAGCTCAGTTCTTGCAGCTTCCCCGAAACCAGCCATGGTCAATACCTGAATAATAATCCACAATGGAATTTTCTCCATAGACAGCAGTTGATGAATCAGCAATTACTTCTGGGTCCTCATCTTCGATTTCAGGGATGA 1035 0.515 MKPPHSNLPPGFRFHPTDHELILHYLSKKVASLPLPVSVIADVDIYKFDPWDLPGEAAFGEREWYFFSPRDRKYPNGARPNRAAVSGYWKATGTDKHIVPPSQPASARHAIGVKKALVFYKGKPPKGIKTNWIMHEYRLGHSNTKPIKLRDTSMRLDDWVLCRIYHRSKHDTSSSSTPEALVTVADQAQDQQQLLKQALLPASTSSTMNPHVPPHTTTLASNKSFSNLLDAMDYSMLSSFLSDQSHSGPTAPASVTGATGGNIMDHHLTVPSAPNMENGRSKRQLPDVDEETLYASKKFQLSSCSFPETSHGQYLNNNPQWNFLHRQQLMNQQLLLGPHLRFQG 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02870 344 FunFam NAC transcription factor 56 17 172 - -
Accr2g02870 344 SUPERFAMILY NAC domain 5 167 IPR036093 GO:0003677|GO:0006355
Accr2g02870 344 Gene3D NAC domain 17 172 IPR036093 GO:0003677|GO:0006355
Accr2g02870 344 ProSiteProfiles NAC domain profile. 8 167 IPR003441 GO:0003677|GO:0006355
Accr2g02870 344 Pfam No apical meristem (NAM) protein 9 139 IPR003441 GO:0003677|GO:0006355
Accr2g02870 344 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02870 Accr-Chr2 64593816 64595027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02870 2 344 NAC Transcription Factor Family AT3G04070 47.368 5.10e-98 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr2g02870 NAM 8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02870 - - gmx:100301906 419.853