Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02869 ATGGAAGAAGCTGCGGCGGCGGCGGCGGCAGTACTGGTGGACAAAGGAGAGGCGGAAGTCCTGGATTTGCCTCCGGGTTTCAGGTTTCATCCGACGGACGAGGAGATCATCACTTGTTATCTGACGGAGAAGGTGCTGAACAGCCGTTTCCGTGCAACTGCAATCGGTGAAGCTGATTTCAACAAGTGTGAGCCTTGGGATTTCCCTAAGAGAGCAAGGATGGGGGAGAAAGAGTGGTACTTCTTCTGTCAAAGGGACCGGAAATATCCGACTGGGACGAGAACGAATAGAGCGACGGAGTCCGGGTACTGGAAGGCGACCGGAAAAGATAGGGAGATATACAGAGGGAAAGACAACCTGGTGGGGATGAAGAAGACCCTCGTCTTCTACAGAGGGAGGGCTCCCAAAGGCGAGAAAACTGGCTGGGTTATGCATGAATTCCGATTAGAGGGCCAATTCGCCACTTACAACCTCCCCAGGGCAGCTAAGGATGAATGGGCGGTGTGCAAGATTTTCCACAAGAACACAGACGTCAAAAAGATTCCTGAGCTTCTAAGGATCAACTCTCTCAGCGATCATCTTGTTGATTACTCTTCCTCGCTCCCGCCTCTCATGGAGCATCCTTCTTTCACTAACGCCGACCAGCCCGGCTACAGTCATTGTGGCCGTGAATTCAAGGATCAGCCGTCATCGGACGGCTATTATTACCCCGACTTCGCCGCCAACAATCAGACGAGGGTGATGAAGGTGGAACAACAAGACCACAGAAACTATGAGATGATGACGATGATCCCCAGTTACTGCACCGGCGACGCCAGTCATAATCCTCTCTCGCGAGGAACAATCCAGAATAATCCGAGTTTGTGGGCTGAGCAGAATAATGTTGTGATGTCAGATTACAGGAACAGAGATGTGATGGGAGGTGGCGTGAAGAATGAAACGGTATCGTGGGGAATGGATAAACAGTGCAATATGGAGCATTCTTCGATGGTGAGTGCGTCGCAGGATACCGGCGGCGTAAGCAATGACAGAAACGCCGAAACATTCTCGGCGGTGTCGTCCAGGAGAGACATCCTAGGAAGGAATAAGGCAGTATACGAGGATGACTTCCCCCTCCACAAGCCTCCATCACTTGGCTCCTTTCCAGATTTGTGCAGCCTCTGGGATGACTACTGA 1176 0.5179 MEEAAAAAAAVLVDKGEAEVLDLPPGFRFHPTDEEIITCYLTEKVLNSRFRATAIGEADFNKCEPWDFPKRARMGEKEWYFFCQRDRKYPTGTRTNRATESGYWKATGKDREIYRGKDNLVGMKKTLVFYRGRAPKGEKTGWVMHEFRLEGQFATYNLPRAAKDEWAVCKIFHKNTDVKKIPELLRINSLSDHLVDYSSSLPPLMEHPSFTNADQPGYSHCGREFKDQPSSDGYYYPDFAANNQTRVMKVEQQDHRNYEMMTMIPSYCTGDASHNPLSRGTIQNNPSLWAEQNNVVMSDYRNRDVMGGGVKNETVSWGMDKQCNMEHSSMVSASQDTGGVSNDRNAETFSAVSSRRDILGRNKAVYEDDFPLHKPPSLGSFPDLCSLWDDY 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02869 391 Gene3D NAC domain 32 179 IPR036093 GO:0003677|GO:0006355
Accr2g02869 391 SUPERFAMILY NAC domain 19 175 IPR036093 GO:0003677|GO:0006355
Accr2g02869 391 Pfam No apical meristem (NAM) protein 24 149 IPR003441 GO:0003677|GO:0006355
Accr2g02869 391 ProSiteProfiles NAC domain profile. 23 174 IPR003441 GO:0003677|GO:0006355
Accr2g02869 391 FunFam NAC domain-containing protein 100-like 32 178 - -
Accr2g02869 391 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 22 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02869 Accr-Chr2 64563064 64564538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02869 4 218 NAC Transcription Factor Family AT5G18270 65.333 7.64e-108 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr2g02869 NAM 4.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02869 - - pcin:129284658 526.939