Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02866 ATGGAGGGTGATGGGCGATTGTGCAACACGTGCTCTAACATGGTGAATCCAATGAGGGAAGGAGAGAACGAATGCCCTGTTTGTGGGTCAGAATTTACAGAGGCAATAATGGAGAACAGAGAAGGCAACGATTTGTTCAGATCATCCTCTGTGTTCTCTCTTTACGCGCCAATACTGCTGGGCTTGATGAATGCTCTCACACCTGCTCTAGCAACCATCATCAGCAACAACAACAACAACGGTTCGAGTTCAAGGCAGGAGGAAGACGACGAGCAAGAGATAACGGAACAGCATGGTGACCTTATGGTTAGAAGAAGAACAAGAAGAAGAACATCGTCCACTTCTCTCATGCTCATCTTTCGTCGTCTCCACACGGAATCTGATCGGAATGCTAATAACACGGAAAACGATCACGGAAACAATGACGGTGGTGGTTATATAAATAATAATGACGTGAATCTCAACGAGGTTGTGATTGATCCGCTTAACGAAGAGGCTTTGATTCTAAGAGGTCCTTTGCAGATGAACAACGCTGGAAGTTATAATTCTCCGATGGGTTGGTCTCTTGGCGACTTTTTGGATGGGCCTGGGTTTGGGTTATTACTGCAACATTTGGCACAGAGTAGTAATAATGAGGTCAATAGATATGTGAATACTGTTAACCCGCCAGCGCAGAGGGCAGCGATAGAGGCGATGCCGACGGTGATGACGGGGGAGAATAAGCAGTGTGTAATATGTTTGGAGGAAGCAGAGATTGGGAGTGAAGTGAAGGAGATGCCATGTGGGCATAAGTTTCACGGTGACTGCATTGTCTCGTGGCTGAAACTTCGGAGTTCTTGCCCTGTTTGTAGGTTTCAGATGCCGTCCGATGATTCCAAGGTTGAAGCTAGCGGTGGACGTCGGAATGAAGGTGTTCGGAGTAATGATCAAGTGATGGATAGAGAACGGAGAATGAGTTTTGGAAGATGGAATTGGCTTTCCATATTGCAGCCACTTGATTACTTTCTTCCCTCTCCTTGA 1020 0.4637 MEGDGRLCNTCSNMVNPMREGENECPVCGSEFTEAIMENREGNDLFRSSSVFSLYAPILLGLMNALTPALATIISNNNNNGSSSRQEEDDEQEITEQHGDLMVRRRTRRRTSSTSLMLIFRRLHTESDRNANNTENDHGNNDGGGYINNNDVNLNEVVIDPLNEEALILRGPLQMNNAGSYNSPMGWSLGDFLDGPGFGLLLQHLAQSSNNEVNRYVNTVNPPAQRAAIEAMPTVMTGENKQCVICLEEAEIGSEVKEMPCGHKFHGDCIVSWLKLRSSCPVCRFQMPSDDSKVEASGGRRNEGVRSNDQVMDRERRMSFGRWNWLSILQPLDYFLPSP 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02866 339 MobiDBLite consensus disorder prediction 294 310 - -
Accr2g02866 339 MobiDBLite consensus disorder prediction 84 107 - -
Accr2g02866 339 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 82 288 - -
Accr2g02866 339 SUPERFAMILY RING/U-box 234 290 - -
Accr2g02866 339 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 209 290 IPR013083 -
Accr2g02866 339 MobiDBLite consensus disorder prediction 78 109 - -
Accr2g02866 339 MobiDBLite consensus disorder prediction 127 147 - -
Accr2g02866 339 FunFam E3 ubiquitin-protein ligase RNF181 212 290 - -
Accr2g02866 339 MobiDBLite consensus disorder prediction 290 310 - -
Accr2g02866 339 Pfam Ring finger domain 242 284 IPR001841 -
Accr2g02866 339 SMART ring_2 243 283 IPR001841 -
Accr2g02866 339 ProSiteProfiles Zinc finger RING-type profile. 243 284 IPR001841 -
Accr2g02866 339 CDD RING-H2_PA-TM-RING 242 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02866 Accr-Chr2 64525028 64526047 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02866 222 304 C3H Transcription Factor Family AT1G26800 52.381 3.50e-24 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02866 - K11982 pcin:129291269 444.506