Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02862 ATGGATGTGTGCCGGAATGTATCAGTTTCCGGTGAGTGCAAGCAAGAGCACCCAAAGCTTTCTTCCTTCTCAACCAGCCTCGATGACCTCTTCTCTGCTCAGAACACGGAGGTGGATGTCGGATTGGAGTGGCTGTCAGTGTTTGTTGAAGACTGCTTTTCAAGCCAAGCAAGCTGCCTCTTGGCACCTCCTGATATTCATCAAGCTACAACCACAACCTCCAAACCTTCACAACCATTGCAGAGACCCCACCAGAATGAGTCTTCTCTGCAAAATTTTCCGGTACCTGGAAAAGCCAGAAGCAAAAGGAAGAGACTTTCAGCCCCGAGAGCCAAAGACCCTTTGAGCATCTGGTCACACCATTTAAACCCACAAAACGAAGCCATAAGCTCAGACCCTCCTCTGCTCAAACAGGCTTACTGGTTAGCAGACAGTGAACTGATCGTCCCCAGGAAGAAGGCAAAGGTGGAAGAGGAAGAAGAAGGAGAAGAAGAGATGGAGAAGAGGATGATGGTGAGGAAGGACTCGGAGAGTGAGGTCAGCAGTGGGCAAAATCCAATGCCAAGGAGGTGCAGTCACTGCTTGGCACAGAGGACCCCACAATGGAGGGCAGGACCATTGGGTCCAAAAACCCTCTGCAATGCATGTGGGGTGAGGTACAAGTCTGGTAGGTTGTTGCCAGAGTATAGGCCAGCCAAGAGTCCAACTTTTGTGAGCTACTTGCACTCCAATTCCCACAAGAAAGTCATGGAGATGAGGATGTCTCTTGTTTCTTCTTCTAATCCCAGAGAGCACCAGTGA 801 0.4994 MDVCRNVSVSGECKQEHPKLSSFSTSLDDLFSAQNTEVDVGLEWLSVFVEDCFSSQASCLLAPPDIHQATTTTSKPSQPLQRPHQNESSLQNFPVPGKARSKRKRLSAPRAKDPLSIWSHHLNPQNEAISSDPPLLKQAYWLADSELIVPRKKAKVEEEEEGEEEMEKRMMVRKDSESEVSSGQNPMPRRCSHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMSLVSSSNPREHQ 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02862 266 PANTHER GATA TRANSCRIPTION FACTOR 27 261 - -
Accr2g02862 266 MobiDBLite consensus disorder prediction 69 95 - -
Accr2g02862 266 CDD ZnF_GATA 190 237 IPR000679 GO:0006355|GO:0043565
Accr2g02862 266 ProSiteProfiles GATA-type zinc finger domain profile. 189 221 IPR000679 GO:0006355|GO:0043565
Accr2g02862 266 FunFam GATA transcription factor 180 265 - -
Accr2g02862 266 Gene3D - 181 254 IPR013088 GO:0006355|GO:0008270
Accr2g02862 266 Pfam GATA zinc finger 191 225 IPR000679 GO:0006355|GO:0043565
Accr2g02862 266 ProSitePatterns GATA-type zinc finger domain. 191 216 IPR000679 GO:0006355|GO:0043565
Accr2g02862 266 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 186 249 - -
Accr2g02862 266 MobiDBLite consensus disorder prediction 154 188 - -
Accr2g02862 266 SMART GATA_3 185 239 IPR000679 GO:0006355|GO:0043565
Accr2g02862 266 MobiDBLite consensus disorder prediction 69 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02862 Accr-Chr2 64503861 64505024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02862 42 253 C2C2-Gata Transcription Factor Family AT4G32890 42.727 5.63e-44 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Accr2g02862 GATA 6.7e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02862 - - pcin:129284700 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02862 2 64503861 64505024 Accr5g01725 5 43599721 43600838 CCT
Accr2g02862 2 64503861 64505024 Accr2g02862 2 64503861 64505024 ECH