Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02844 ATGGAAATTCAATTCCAGCAGCCAAAGCAGCAGCATCAGAAAGCAGGCATTCCGATCAGCAAAGTGGGCAAATTCAAAGGAAGAAACAGAATCCGAGGAAACCCAAACAAGTTTGTAGGGGTGAGGCAGAGGCCTTCAGGGAGATGGGTGGCTGAGATCAAAGACACAACACAGAAGATAAGAATGTGGCTTGGCACATTTGAGACTGCAGAGGAAGCTGCCAGAGCTTATGACGAAGCTGCTTGCCTTCTTCGAGGAGCCAACACTCGCACCAACTTCATCACCCATGTCTCCTTGGATTCTCCTCTGGCCTCCCGGATTAGGAAACTTCTCAACAACAAAAAAACTGCAACTAAGCAGCAGCAACAACAAAAAGATCGTGTGGTAGCAGCCTCTGCCCCTAAAGCCAGAAGCACCAATACTGGCACTACTAGCAGTACTAGTGCTAGTATTAGCAGTAGTTCTAGCAATAATATTGACAGCAATCAAAGTTCTCTTTCCAGTGGGACAGCCCATGATACCTCTCTGTTTGATGATGCTTATAGACCAGATATGAGCAACTGCAAGGAGGAATTTGGGTTTGGTTCCACGTCCAATCTTTCATGGGGTGGTTTTGGACCAGTTTTTGATCAGTTTCCTCTTCCTCAGGTTTCAGATGTTCCTAAGAATGACGGGGGTATGCCTAATGTTGGTGACTTGGATCTTTTAGAATTTGAGAGGATGAAAGTTGAGAGGCAAATTTCAGCTTCACTGTATGCAATTAACGGAGTGCAAGAGTACATGGAAACTGTTCAGGACTCCAGTGAAGCTCTGTGGGATCTTCCACCCTTGTGTTCACTGTCCTGTTAA 849 0.4582 MEIQFQQPKQQHQKAGIPISKVGKFKGRNRIRGNPNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGANTRTNFITHVSLDSPLASRIRKLLNNKKTATKQQQQQKDRVVAASAPKARSTNTGTTSSTSASISSSSSNNIDSNQSSLSSGTAHDTSLFDDAYRPDMSNCKEEFGFGSTSNLSWGGFGPVFDQFPLPQVSDVPKNDGGMPNVGDLDLLEFERMKVERQISASLYAINGVQEYMETVQDSSEALWDLPPLCSLSC 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02844 282 ProSiteProfiles AP2/ERF domain profile. 37 94 IPR001471 GO:0003700|GO:0006355
Accr2g02844 282 Pfam AP2 domain 37 86 IPR001471 GO:0003700|GO:0006355
Accr2g02844 282 Coils Coil 107 127 - -
Accr2g02844 282 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 12 247 - -
Accr2g02844 282 MobiDBLite consensus disorder prediction 114 171 - -
Accr2g02844 282 SMART rav1_2 37 100 IPR001471 GO:0003700|GO:0006355
Accr2g02844 282 SUPERFAMILY DNA-binding domain 37 94 IPR016177 GO:0003677
Accr2g02844 282 CDD AP2 37 93 IPR001471 GO:0003700|GO:0006355
Accr2g02844 282 PRINTS Ethylene responsive element binding protein signature 38 49 IPR001471 GO:0003700|GO:0006355
Accr2g02844 282 PRINTS Ethylene responsive element binding protein signature 60 76 IPR001471 GO:0003700|GO:0006355
Accr2g02844 282 Gene3D AP2/ERF domain 36 95 IPR036955 GO:0003700|GO:0006355
Accr2g02844 282 FunFam ethylene-responsive transcription factor RAP2-11 36 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02844 Accr-Chr2 64357423 64358271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02844 24 282 AP2-EREBP Transcription Factor Family AT5G19790 42.697 1.14e-50 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr2g02844 AP2 6.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02844 K09286 - gmx:100796898 345.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02844 2 64357423 64358271 Accr2g02844 2 64357423 64358271 ECH