Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02843 ATGAGGAGTCCAAGAGTGAAAGGGCAGATCACGCCATGTTGTAGCAAGGTAGGGATAAAGAGAGGGCCTTGGACGCCGGAGGAAGATGAGGTCTTGGCCAATTTCGTCAAGAAGGAAGGCGAAGGACGGTGGCGCACCCTTCCCAAGCGGGCGGGGCTGCAGCGCTGCGGCAAGAGCTGCCGTCTCCGATGGATGAACTATCTCCGTCCCTCCGTCAAGAGAGGCCATATTGCTCCCGATGAGGAAGATCTCATCCTCCGCCTTCACCGCCTCCTGGGCAACAGGTGGTCTCTGATAGCTGGGAGGATACCTGGGAGGACCGATAACGAGATCAAGAACTACTGGAATACCCACCTAAGCAAGAAGCTTATAAGTCAGGGAATAGACCCTAGGACTCACAAGCCTTTACCCTCTTTCCACAATAATTCCAAAACTCATGAATCCAATAATCCTGATCAATCATCTGCACCACAGATTAACAGTTGTTGCAGCCAGCAAAATCAGACAAATAATGTTATCCAAATCAACAGTTCTGTCGTCGTCACTACTGGGAATAATTGGGGAACAACAAGCAGCGGCAAAGTGGCGGCAAGTCTTGAAGAAAATGGGGTTGAGGTTGAAGGAGAGGTTGAAGACAAGATTATGGGGGAAGAAGATGATACCCTATCTTCGTTTCTGGAATCTTTGATCAACAACAACGACAACCAAGTACTTGGGAATCAACAGTCGCAGGACCTCCACGTGTTTCATGCTCCACCACCACATCCAACAATGGCTTCTTCTTCTTCTTCCCACCAATTTTTCGATCTTTCCTTCTGGGAATCTGAATTCCAGAGTTTCGGAGGAGATCATCAACAGTATGGTTACCCTTTCAAGTAA 879 0.4869 MRSPRVKGQITPCCSKVGIKRGPWTPEEDEVLANFVKKEGEGRWRTLPKRAGLQRCGKSCRLRWMNYLRPSVKRGHIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLISQGIDPRTHKPLPSFHNNSKTHESNNPDQSSAPQINSCCSQQNQTNNVIQINSSVVVTTGNNWGTTSSGKVAASLEENGVEVEGEVEDKIMGEEDDTLSSFLESLINNNDNQVLGNQQSQDLHVFHAPPPHPTMASSSSSHQFFDLSFWESEFQSFGGDHQQYGYPFK 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02843 292 MobiDBLite consensus disorder prediction 128 163 - -
Accr2g02843 292 FunFam transcription repressor MYB5-like 78 148 - -
Accr2g02843 292 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 68 IPR017930 -
Accr2g02843 292 SMART sant 73 121 IPR001005 -
Accr2g02843 292 SMART sant 20 70 IPR001005 -
Accr2g02843 292 Gene3D - 21 73 - -
Accr2g02843 292 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 11 222 - -
Accr2g02843 292 CDD SANT 79 119 IPR001005 -
Accr2g02843 292 CDD SANT 23 68 IPR001005 -
Accr2g02843 292 ProSiteProfiles Myb-like domain profile. 16 68 IPR001005 -
Accr2g02843 292 Gene3D - 78 160 - -
Accr2g02843 292 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 123 IPR017930 -
Accr2g02843 292 FunFam Myb transcription factor 18 74 - -
Accr2g02843 292 MobiDBLite consensus disorder prediction 136 163 - -
Accr2g02843 292 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Accr2g02843 292 Pfam Myb-like DNA-binding domain 79 119 IPR001005 -
Accr2g02843 292 Pfam Myb-like DNA-binding domain 21 68 IPR001005 -
Accr2g02843 292 SUPERFAMILY Homeodomain-like 18 115 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02843 Accr-Chr2 64346935 64347935 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02843 6 232 MYB Transcription Factor Family AT3G13540 58.150 6.07e-82 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr2g02843 Myb_DNA-binding 5.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02843 K09422 - qsu:112003883 289.271