Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02788 ATGGGAAGGCCTCCTTGCTGCGAGAAAGTTGGCATCAAGAAGGGTCCATGGACACCAGAGGAAGACATCATTCTTGTTTCTTACATCCAAGAACATGGTCCAGGAAATTGGAGATCAGTTCCTACTAATACTGGGTTGTCAAGGTGCAGCAAAAGTTGCAGGCTGAGATGGACGAACTACCTCAGGCCAGGAATCAAGAGAGGGAACTTCACTCCGCATGAGGAAGGAATCATAATTCATTTGCAAGCTCTACTGGGTAACAAATGGGCAGCCATAGCTTCGTACCTTCCTCAAAGGACAGATAATGATATAAAGAACTTTTGGAACACCCATCTGAAGAAGAAGCTGAAAAAACTTCAAACAGGATTGGACCCCCACCTGGCAGCAAACTCTACAACAACTACTCAGTCTACTTCAAAAGGCTTTAACAATAATGAGAGCAAGAGTTCAGACAACAACCATGGTGGCTCGTCTCAAAGGTTAAGTCAGTCTCAATCATCCACCTATGCTTCGAGCACTGAGAACATATCTCGTCTCTTAGAAGGTTGGATGAGATCTTCACCAAAGCCAGACACAGCTAATAATCTTAATCTCAAAGCAACAAGCCAAGTAGATCACAAAGAGCTTCTTCTTCAGAGCAACAGCAACGTGGAAAATAATAGCAGTAACATGGTGATGATGAAGTCTGGTCTAAGTCTGATGTCCAACCAAAACAAAGACGAGGGAGAAGAGGGAGGTGGTGACATGATGTCCCATGAAGAGTTTGATTCCATTTTGTCTTATGAGAACCTTAATAATGCTGCTTGGGACAAGTCCACAGGCGATTCTATGCCTCCAACAACTCACAAGAGTACAACTTCTGAAGTTGCTGCTGCTGCTGCTGATGACGACGGCAACAAGGTTCGCGTTATGGCTCATGATGAGAGGAATAATAAGCAAAGATCTGAGAACACTTCTTCTGATCCTTCATTGTCAGTTCTTGAGAAGTGGCTCTTGGATGAAAATGTTGGTCAGGTAGAGGAGATGATGGAATTATCCCTTACTTTCTAA 1050 0.4371 MGRPPCCEKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLSRCSKSCRLRWTNYLRPGIKRGNFTPHEEGIIIHLQALLGNKWAAIASYLPQRTDNDIKNFWNTHLKKKLKKLQTGLDPHLAANSTTTTQSTSKGFNNNESKSSDNNHGGSSQRLSQSQSSTYASSTENISRLLEGWMRSSPKPDTANNLNLKATSQVDHKELLLQSNSNVENNSSNMVMMKSGLSLMSNQNKDEGEEGGGDMMSHEEFDSILSYENLNNAAWDKSTGDSMPPTTHKSTTSEVAAAAADDDGNKVRVMAHDERNNKQRSENTSSDPSLSVLEKWLLDENVGQVEEMMELSLTF 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02788 349 MobiDBLite consensus disorder prediction 123 172 - -
Accr2g02788 349 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Accr2g02788 349 Gene3D - 13 66 - -
Accr2g02788 349 CDD SANT 16 61 IPR001005 -
Accr2g02788 349 FunFam MYB-related transcription factor 13 66 - -
Accr2g02788 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Accr2g02788 349 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 221 - -
Accr2g02788 349 SMART sant 13 63 IPR001005 -
Accr2g02788 349 SMART sant 66 114 IPR001005 -
Accr2g02788 349 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Accr2g02788 349 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Accr2g02788 349 Gene3D - 68 154 - -
Accr2g02788 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Accr2g02788 349 CDD SANT 69 111 IPR001005 -
Accr2g02788 349 MobiDBLite consensus disorder prediction 270 300 - -
Accr2g02788 349 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Accr2g02788 349 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Accr2g02788 349 MobiDBLite consensus disorder prediction 270 288 - -
Accr2g02788 349 MobiDBLite consensus disorder prediction 125 172 - -
Accr2g02788 349 FunFam Transcription factor MYB60 68 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02788 Accr-Chr2 63735691 63737072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02788 1 141 MYB Transcription Factor Family AT5G62470 78.231 7.69e-83 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr2g02788 Myb_DNA-binding 1.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02788 K09422 - gmx:100817854 411.764