Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02738 ATGGAACAAGAGCCGCTTCTGCCGAGTGAGGATATTCGTCGCACTCGTGGGAGTATTCCCATGCTCCGCGCCTCCACCTTACGCGCCACTTTCACTCTTCCCTTAACTCGCTACACCACCCGTCTGATCGCCGCCGAGCACCACCGGATTTTCCTTGGCGATTGTACGGAGAACCCGTCTGAGGACGACGATGACCGACCCCTTGAAGATAGCAGTTGCGCCTATTCGAGGCCCATTTTGGTTCTTGACCTTGTGTGGAACCTGGCCTTTGTACTGGTCACTGCTGGTGTGCTTCTTTCCACACTTAGCGAGCATCCGTCCACCCCATTGAGGCTTTGGCTCTGCGGGTATGCCTTCGAGTGTATTCTGCATATGGGTTTTGTGTGCTTTGAGTATTGGCGGAGGACTCGAGATTTTTACGGTGCTGAGCTTGGGCTTTCGTTTTCCCAGAGTTGGAACAGCAATGTGAAGAAGTTAGAGTCTTTGAACACACTGGTATCATCTATTTGGTGGGTCCTTGGGTTTTATTGGATTGTGGTGGGTGGCCAGCAACTTTTGCAAGACTGTCCTCGTATCTACTGGTTAACAGTGGTCTTCCTAGCCTTTGATGTGTTTTTTATTATCTTTTGCATTGGGATGGTATGTATAGTTTTCTTTGCTCTCTTCTTCTTCATCCCAATAGTAGCATTAGCTTATGCTATGAGAATCAGAGAAGGCGCATCAGAAGATGATATCAGGTCTCTTCCTAAGTATAAGTTTGGTCAGTCAAATTCATTGGTGATGGTTGAAGACAGTAATAAGCAAGGTTCTCAAGCAAGAAAGTGCGCAAGCAATAGCAACCTTGTCAGTGAATTATATCTCAACCCAGATGATTCTGAATGCTGCATCTGCATTTCTCCATACGTTGAAGGGGCAGAACTTTATCGCCTTCCCTGCACACACCATTTTCATTGTGGATGCATCAGCAGATGGCTTCGGACAAAAGCAACCTGCCCTCTCTGCAAATTTAATATTCTTAGAAGTGATACATTGGTTTGA 1038 0.4682 MEQEPLLPSEDIRRTRGSIPMLRASTLRATFTLPLTRYTTRLIAAEHHRIFLGDCTENPSEDDDDRPLEDSSCAYSRPILVLDLVWNLAFVLVTAGVLLSTLSEHPSTPLRLWLCGYAFECILHMGFVCFEYWRRTRDFYGAELGLSFSQSWNSNVKKLESLNTLVSSIWWVLGFYWIVVGGQQLLQDCPRIYWLTVVFLAFDVFFIIFCIGMVCIVFFALFFFIPIVALAYAMRIREGASEDDIRSLPKYKFGQSNSLVMVEDSNKQGSQARKCASNSNLVSELYLNPDDSECCICISPYVEGAELYRLPCTHHFHCGCISRWLRTKATCPLCKFNILRSDTLV 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02738 345 ProSiteProfiles Zinc finger RING-type profile. 294 335 IPR001841 -
Accr2g02738 345 PANTHER TARGET OF ERK KINASE MPK-1 69 339 - -
Accr2g02738 345 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 286 344 IPR013083 -
Accr2g02738 345 SUPERFAMILY RING/U-box 286 340 - -
Accr2g02738 345 SMART ring_2 294 334 IPR001841 -
Accr2g02738 345 Pfam Ring finger domain 293 335 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02738 Accr-Chr2 63272581 63275690 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02738 74 342 C3H Transcription Factor Family AT1G68070 45.000 1.12e-84 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02738 - - pcin:129306192 658.292