Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02725 ATGTCAAATAGCAGAAACACTCATTGGTGTTATAGTTGCAGGAGGCCAGTTCAGCTGCGGGGGCGTGATGTGGTTTGTCCTAATTGTAATGAGGGATTTATTCAAGAACTTAATGATATGATCATCAACCCACTAGAATTCTTTGGATTAGACAATGTTGAAGAACGTGACCGGAGGTTCAGAATTATGGAAGCGTTCCCTGCCTTTACGAGGCATCGACCAGTAAATAGAAGCCATAGGCATGACATCATAGTTGGATCAGATTCTGAACATGGTCCAGGGTATGCTCCTTTGCTGCTCTTTGGTGGCCAGATTCCAGTCAGATTGTCTGGACATGGTGGCTTCGAAGCACTTTTCAATGGGACTCCTGGAATCGGTCTGATGCAAGGCAATACAGGTGATTATTTTATTGGTCCTGGACTGGAAGAACTGTTCGAACAGCTTTCTGCTAATGACAGGCGAGGTCCTCCTCCAGCTGCCAGGTCCTCAATAGATGCAATGCCTACTATCAAGATCACGCATAAGCTTCTTCGTTCAGACTCACATTGTCCAGTTTGCCAAGATAAATTTGAACTGGGGTCGGAAGCAAGGCAAATGCCATGTAAACATATATATCACTCAGATTGTATTGTTCCCTGGTTGGTACAGCATAACTCCTGCCCTGTTTGTCGCCAGGAGTTGCCACCACAAGGATTGAGCGGCAACCGTGGCTCCAATGGTAGAACTAGAAGCAATTCTGATAGTAATAGTGGAAGTGGAAGGGTAAGGGAGAACCAGGGCAGGCGGAACCTGTTCTCGTTATTTTGGCCTTTCCGTTCATCTAATTCAAGCAACAATGGAGCAGGAGGAAGCAGCTCACCAACACAACCTATCCCTGAGAGTAGCCACCACACCGGCTATTCTGGATGGCCATTTGAGTACTAG 924 0.4643 MSNSRNTHWCYSCRRPVQLRGRDVVCPNCNEGFIQELNDMIINPLEFFGLDNVEERDRRFRIMEAFPAFTRHRPVNRSHRHDIIVGSDSEHGPGYAPLLLFGGQIPVRLSGHGGFEALFNGTPGIGLMQGNTGDYFIGPGLEELFEQLSANDRRGPPPAARSSIDAMPTIKITHKLLRSDSHCPVCQDKFELGSEARQMPCKHIYHSDCIVPWLVQHNSCPVCRQELPPQGLSGNRGSNGRTRSNSDSNSGSGRVRENQGRRNLFSLFWPFRSSNSSNNGAGGSSSPTQPIPESSHHTGYSGWPFEY 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02725 307 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 146 230 IPR013083 -
Accr2g02725 307 ProSiteProfiles Zinc finger RING-type profile. 183 224 IPR001841 -
Accr2g02725 307 MobiDBLite consensus disorder prediction 276 307 - -
Accr2g02725 307 CDD RING-H2_RNF126-like 183 224 - -
Accr2g02725 307 SMART ring_2 183 223 IPR001841 -
Accr2g02725 307 MobiDBLite consensus disorder prediction 276 296 - -
Accr2g02725 307 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 119 228 - -
Accr2g02725 307 MobiDBLite consensus disorder prediction 231 257 - -
Accr2g02725 307 FunFam E3 ubiquitin-protein ligase RING1-like 146 230 - -
Accr2g02725 307 Pfam zinc-ribbon 6 37 IPR039525 GO:0061630
Accr2g02725 307 SUPERFAMILY RING/U-box 163 230 - -
Accr2g02725 307 Pfam Ring finger domain 182 224 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02725 Accr-Chr2 63154692 63156566 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02725 118 228 C3H Transcription Factor Family AT5G01980 41.739 2.18e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02725 K11982 - gmx:100787523 447.203