Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02718 ATGTCAGACAGAGTAACCCTGGGCGATGCTGATGACAGAAAGCTTAAGCGCAAGATGACTGAGGCGTCGTCATCAGAACCTCGGCTTCCTTCCATGGACGATGCCGGCGACGATGACTCAGAGGGGCTTCTGACTCTGAAGCTGATGGTGGGTGGCGAACCAGCAGTGGATGAGGCGGCAAACAATGGAGAGAGAGCAACAAGGAAGAGTAACAATAATAATCAGCAGCGAAACTTGGGTTGCAAGTTTTGCGACAAGAAGTTTCCTAGCTCTCAAGCTCTGGGTGGACACCAGAATGCTCACAAGCGTGAGCGTATGCTGAGCAGGCTTGACAGAGAGATTGATATGGGCACTTTTGGATACTGTGGCGGTCGCTTTTGCCCATATTCAACCATGGCTAATTATGCCTTCACTACAGGTGGGTCACCTTTTTATGCAGGGCTTTATCATCATCATCACAAGATGAACCCACTGATGCCTCGTTATGGCTTGCAAGCGCCTGCAGCCAGCTCGCCCCTAGAGGCGTTCCGGTTCGGCTCAAGGAGCTCCTGGGCCGACGACGATGGAGCGGACGTTCAACGCAGAGGGACGAGAAACAGTGCTCGGAGTTCTTCACCAGGAAGTGCGAGTGCGAGTGTTGGAGGCCTCGGGACGAACTCAGATATGGAAAGCCTTGATGATACGCCTTCAGACCTCGACTTGTCTCTCAGTCTTTAA 717 0.5258 MSDRVTLGDADDRKLKRKMTEASSSEPRLPSMDDAGDDDSEGLLTLKLMVGGEPAVDEAANNGERATRKSNNNNQQRNLGCKFCDKKFPSSQALGGHQNAHKRERMLSRLDREIDMGTFGYCGGRFCPYSTMANYAFTTGGSPFYAGLYHHHHKMNPLMPRYGLQAPAASSPLEAFRFGSRSSWADDDGADVQRRGTRNSARSSSPGSASASVGGLGTNSDMESLDDTPSDLDLSLSL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02718 238 ProSitePatterns Zinc finger C2H2 type domain signature. 81 101 IPR013087 -
Accr2g02718 238 ProSiteProfiles Zinc finger C2H2 type domain profile. 79 106 IPR013087 -
Accr2g02718 238 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 63 238 IPR044246 GO:0009788
Accr2g02718 238 Pfam C2H2-type zinc finger 81 103 - -
Accr2g02718 238 MobiDBLite consensus disorder prediction 196 238 - -
Accr2g02718 238 Gene3D Classic Zinc Finger 61 116 - -
Accr2g02718 238 MobiDBLite consensus disorder prediction 1 23 - -
Accr2g02718 238 MobiDBLite consensus disorder prediction 1 44 - -
Accr2g02718 238 SUPERFAMILY beta-beta-alpha zinc fingers 77 106 IPR036236 -
Accr2g02718 238 MobiDBLite consensus disorder prediction 185 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02718 Accr-Chr2 63107631 63108347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02718 77 238 C2H2 Transcription Factor Family AT1G24625 33.333 5.41e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02718 - - pcin:129302275 222.631