Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02703 ATGCCTTCAAAGGGAAAAAAGCATGCCAAGACACAGTCGAGGCTATCCACTTCTGACGTGGCCTCTCCTCGTACACCACCACTGACTCCTAACAGAGATTCAGATGTGAGTGAAGAAGAACTTATCCTTTCATGTGAAGAAGCTTCAAAAATATACCCGCCTTTCATTGGTAAATCCGCTTTTGTTGGCGATATCAGTGCTGTGGAGCTGAAATCCAAAGGCTGTAAAATTTGGCTTTCTGAGCCTTCCATGGTTTCTTTTTCCCTTGCCCCTGGTTCCATTGTGTCGGTGTCATTTCCATGTTCAAGGAGGGAAAATCTGGATTCAGATAGCTTTCCTCTTAAATCATTAATGAAAGAATGTGCTGGATGCTATGGACTGGATTATGGGAACACTTCAGTTGATGGCGCAGGAAACTACTTTGCTCTTGCAACAGTTTTTCCTTCTAGCAAGGTTTTGAAGAATGGAGTACAAATTTCATCAGAACTTTCTTATACCATGGGATGTCCCACTATTGGTACACATGTGTTCGTTTATCCAGTGCAGAATCAATGCCTATCTTCTCTCATAAATGAGAAAAATGAACCACAAACTATAGAAGATAATAGCTTGGTGGTGTATAATTGCAAGGAATTGTATCTTCAGTTGGCTCCTTTGAAGAACGGATTACCCATGAAAATCAGTAACTTATCACCAATGGACTTGTCTGCAGCAAAATCCCATCTTCAGTTTGGGATTGAAAATGTTACTTCTCCTAAAACACCTTCTAATGGATTGAAATTGTCTAGTTTGAGTGATTTATCTTCACCTATATTTGAAGATTCTTCTTCTAGCACACCTAATCAAAAGAGCCAATCACTGATTTCATTTGATCTAAGGGAGGCGTTGGGGGATGAAAGCTCCAAAAAACTACTGCAGACATGTGCAGCATCATGGTTGTATTCCCGTTGGTTACTGCTAGGGAATATTGTGACCATACAAATATTTTCAGAGCTGTGCGTTTTCCAAGTTGTAGGGGCTAAAAGGGTGTCAGTAGACCGATCTATTCCTGATTCATCCATTGAAAGTGGTTCTTCATACCCAGAGGGTCCTGACATATCAGAGCATATAAATCAGGCTATCATTGTCAACCATGAAACAAAGGTATCTTTATCTTTGCCTTCAAATGTGACTTCTGATGAGCTGATTCAAAGAGACTTGTCTAAGGTGGAACTCAGGGAGAAGGGCACTAAGGCTAGTGTACCTAATAATGTTTCAAAATTGGGTGGTCTTTCTAAAGAATATGCAGTTTTGAAGGATATAATTTTGTCTTCAGTAAAAAATGATCTATTAAGTAACTTCGGGTTACGAACTACAAAAGGCGTTCTTCTTCATGGTCCTCCTGGCACAGGAAAAACTTCCCTAGCTCAATTATGTGCTTATGATGTGGGGGTCAATATTTTTCAGATAAATGGACCTGAAATTGTAGGCCAATATTATGGTGAAAGTGAGCAAGCATTGCACGAAGTTTTTGATTCTGCCATTCAGGCTGCACCTGCAGTGGTTTTTATTGATGAGTTGGATGCTATTGCCCCTGCAAGGAAAGATGGTGGTGATGAGCTTTCTCAGAGAATGGTAGCCACCTTATTGAATCTTATGGATGGAATTTGTAGAACTGAAGGATTACTTGTTATTGCTGCCACCAACAGGCCTGACAATATTGAGCCTGCTCTGAGGCGACCTGGAAGATTTGACAAGGAAATTGAAATTGGTGTGCCATCTCCTTACCAACGGTTGGATATGTTGCTCACTCTTCTCAGTGAAGTGGATCACACTCTTACAGAGATACAAATTGAACATCTTGCCACCGTCACACATGGTTTTGTGGGTGCTGATCTAGTTGCCCTTTGCAAAGAGGCAGGCTTGGTTTGTCTTAGACGTTATTTTAATTTTAAGAAGGATTGGCATAATTGCTGCTATGATGGAACATCCTCACTATATAAAGGTCAGCAACATGCTTTGCTGAAAGGTGCAGAAGACTCAAGAGATCATTCTGGCCATTCAACTTCATCTGTTTCTGAGTTATCAACTTCATCTGTTTCAGAGTTATCAGTGGCTTCAAACTCTTTGCTACCTTCCTGCATGATAGGTTCAACTTCTGACAATATAGGCATACCTGATAGGGGTGAAGATCATAATTTGAAAGTAACTTGTGAAGATTTTCAGAAGGCAAGAATGATAATAAGACCCAGTGCCATGAGAGAGGTAATCCTGGAGGTTCCTAAGGTCAAGTGGGAAGATGTTGGGGGCCAAAAAGATGTCAAGGCCCAACTGATGGAAGCAGTAGAATGGCCCCAGAAGCACCATGATGCATTGAAGCGTATTGGAACTCACCCTCCAAAAGGTGTGTTGATGTTTGGGCCTCCTGGCTGTAGCAAAACTCTTATGGCACGTGCAGTTGCTTCTGAAGCTGCACTGAACTTTCTGGCTGTCAAGGGTCCGGAACTCTTCAGTAAATGGGTAGGTGAATCTGAGAAGGCTGTCAGATCTTTGTTTGCAAAAGCAAGGGCCAATGCCCCATCTATTGTATTTTTTGATGAAATAGACGGCCTTGCTGTTACAAGGGGGAAGGAAAGTGATGGGGTTTCAGTGTCAGATAGAGTCATGAGTCAACTTCTAGTTGAATTGGATGGTCTGCATGAAAGAGCTAATGTCACTGTCATTGCTGCTACAAATAGGCCAGACAAGATTGATCCTGCCCTTTTAAGACCAGGACGCTTTGACCGTCTGCTGTATGTGGGACCACCAAATGAGATAGACAGAGAAGAGATATTCCGTATCCACTTGCATAAAATCCCACGTGGTTCTGATGTAAGCCTGAAAGAACTGGCTTCTCTTACAGATGGTTTTACTGGTGCTGATATATCACTAATATGCCGGGAGGCAGCTGTTGCAGCTATTGAGGAGAGCCTTAAAGCTTCTGCAATAACAATGAAGCATTTGAAGACGGCAATTAAACAGGTCCAACCAACAGAGATTCAGTCTTACCAACAGTTGTCGGCTAAATTTCAAAGGGCCGTCAGCACCTCTGTTATAAAACATGAGGCAAGCAGTATGCAGTGCTCAAACAGATCTACTTGGCCCTCCGTTGGGAAGTTCATAAGATCTCTCAAATTGTTTCTGTATCGGATTTCAGTGGCCATTTTTATTTGA 3192 0.4192 MPSKGKKHAKTQSRLSTSDVASPRTPPLTPNRDSDVSEEELILSCEEASKIYPPFIGKSAFVGDISAVELKSKGCKIWLSEPSMVSFSLAPGSIVSVSFPCSRRENLDSDSFPLKSLMKECAGCYGLDYGNTSVDGAGNYFALATVFPSSKVLKNGVQISSELSYTMGCPTIGTHVFVYPVQNQCLSSLINEKNEPQTIEDNSLVVYNCKELYLQLAPLKNGLPMKISNLSPMDLSAAKSHLQFGIENVTSPKTPSNGLKLSSLSDLSSPIFEDSSSSTPNQKSQSLISFDLREALGDESSKKLLQTCAASWLYSRWLLLGNIVTIQIFSELCVFQVVGAKRVSVDRSIPDSSIESGSSYPEGPDISEHINQAIIVNHETKVSLSLPSNVTSDELIQRDLSKVELREKGTKASVPNNVSKLGGLSKEYAVLKDIILSSVKNDLLSNFGLRTTKGVLLHGPPGTGKTSLAQLCAYDVGVNIFQINGPEIVGQYYGESEQALHEVFDSAIQAAPAVVFIDELDAIAPARKDGGDELSQRMVATLLNLMDGICRTEGLLVIAATNRPDNIEPALRRPGRFDKEIEIGVPSPYQRLDMLLTLLSEVDHTLTEIQIEHLATVTHGFVGADLVALCKEAGLVCLRRYFNFKKDWHNCCYDGTSSLYKGQQHALLKGAEDSRDHSGHSTSSVSELSTSSVSELSVASNSLLPSCMIGSTSDNIGIPDRGEDHNLKVTCEDFQKARMIIRPSAMREVILEVPKVKWEDVGGQKDVKAQLMEAVEWPQKHHDALKRIGTHPPKGVLMFGPPGCSKTLMARAVASEAALNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIVFFDEIDGLAVTRGKESDGVSVSDRVMSQLLVELDGLHERANVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNEIDREEIFRIHLHKIPRGSDVSLKELASLTDGFTGADISLICREAAVAAIEESLKASAITMKHLKTAIKQVQPTEIQSYQQLSAKFQRAVSTSVIKHEASSMQCSNRSTWPSVGKFIRSLKLFLYRISVAIFI 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02703 1063 MobiDBLite consensus disorder prediction 1 37 - -
Accr2g02703 1063 SMART AAA_5 792 930 IPR003593 GO:0016887
Accr2g02703 1063 SMART AAA_5 451 587 IPR003593 GO:0016887
Accr2g02703 1063 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 754 1005 IPR027417 -
Accr2g02703 1063 PANTHER AAA-FAMILY ATPASE 73 1017 - -
Accr2g02703 1063 Pfam ATPase family associated with various cellular activities (AAA) 796 927 IPR003959 GO:0005524|GO:0016887
Accr2g02703 1063 Pfam ATPase family associated with various cellular activities (AAA) 455 584 IPR003959 GO:0005524|GO:0016887
Accr2g02703 1063 FunFam spermatogenesis-associated protein 5-like protein 1 929 1011 - -
Accr2g02703 1063 CDD RecA-like_CDC48_r2-like 767 926 - -
Accr2g02703 1063 ProSitePatterns AAA-protein family signature. 898 916 IPR003960 GO:0005524|GO:0016887
Accr2g02703 1063 CDD RecA-like_CDC48_NLV2_r1-like 420 583 - -
Accr2g02703 1063 FunFam Putative vesicular transport protein (CDC48) 405 584 - -
Accr2g02703 1063 FunFam Calmodulin-interacting protein 111 586 756 - -
Accr2g02703 1063 FunFam calmodulin-interacting protein 111 isoform X1 753 928 - -
Accr2g02703 1063 Gene3D - 585 706 - -
Accr2g02703 1063 Gene3D - 929 1014 - -
Accr2g02703 1063 Gene3D - 398 584 IPR027417 -
Accr2g02703 1063 Pfam AAA+ lid domain 950 995 IPR041569 -
Accr2g02703 1063 Pfam AAA+ lid domain 609 642 IPR041569 -
Accr2g02703 1063 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 415 640 IPR027417 -
Accr2g02703 1063 MobiDBLite consensus disorder prediction 14 32 - -
Accr2g02703 1063 Gene3D - 753 1025 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02703 Accr-Chr2 62988870 62997960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02703 1 1056 Calmodulin-binding Proteins AT3G56690 56.168 0.0 1038
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02703 - - gmx:100788600 1305.43