Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02682 ATGTCTTCGGATGAGTCTCTAAGATCTCTATCTATGGACTATCTCAACCTCCTCATCAACGGTCAGGCCTTCAGTGACGTCACTTTCAGCGTGGAGGGTCGCCTGGTTCCCGCCCACCGCTGCATCCTGGCGGCTCGAAGCCTCTTCTTCAGGAAATTCTTCTGCGGTCCGGACACGCCCTCCGGCCTGGACCTCATGGGCTCGGGCTCGCGGGTCAACTCGGCCACATCTCCGTCGTCCAGACCCGGGGTTATTTCGGTGAACTCGGTGGGCTATGAAGTGTTCCTGCTTCTGCTTCAGTTCTTGTACAGTGGCCAAGTCTCAGTTGTGCCTCAGAAGCACGAGCCCAGGCCTAATTGCGGCGAAAGGGGCTGCTGGCACACGCATTGCACCTCCGCCGTTGATCTCGCCCTTGATACTCTCGCTGCCGCTAGATCCTTTGGCGTTGAGCAGCTCGCATTGCTCACTCAGAAACAATTGGCCAGCATGGTAGAGAAGGCCTCCATTGAAGATGTGATGAAAGTGCTTCTAGCTTCAAGAAAGCAAGACATGCACCAACTTTGGACTACTTGTTCGCACCTCGTTGCCAAGTCTGGTCTCCCTCCTGAAGTCCTCACCAAACACCTTCCCATCGATGTTGTTGCTAAAATAGAAGAGCTTCGCCTCAAAACGTCCCTCGTCCGTCGCTCCCTGATCCCTCCGCACCACCACCACGACCATATCACCGCCACAGCAGATCTCGAGGACCAGAAAATCCGCCGAATGAGAAGAGCACTTGACTCCTCGGATGTTGAACTCGTGAAGCTCATGGTTATGGGAGAAGGTTTAAATCTAGACGAAGCATTGGCCTTACACTACGCTGTAGAGAATTGCAGCCGTGAAGTCGTTAAGGCCTTGCTCGAGCTCGGTGCAGCCGATGTCAACTACCCCGCCGGACCCGCTGGCAAAACCCCTCTCCACCTTGCCGCAGAGATGGTGTCACCGGACATGGTGGCTGTCCTCCTTGACCACCACGCGGACCCGAACGTCCGGACCGTCGACGGGGTAACCCCTCTTGACATCTTGAGAACCCTAACTTCTGATTTTCTGTTCAAAGGAGCTGTCCCTGGGCTTGCTCATATTGAACCTAACAAATTAAGGTTGTGTTTGGAGCTGGTTCAATCCGCGGCTCTTGTACTGTCACGTGAGGAAGGCAATGCGAATCCTCCTTCTTCAACTGCCATTTATCCTCCAATGAACGAAGACCATAATAGCAGCAGTAGCAATAGCAATATCGCGAACCTTAATCTGGACGCAAGACTAGTTTACCTGAATCTGGGTGCAGCACAAATGGGTTCGAGATTGGACGGCGACGAAGATAGCAGCCACAGTAGCCATCAGAACCGTCATGGCTCTCAAGGTGGATCACGTGACCAAACAATGAGGCATTTAAGGGGTCAGCAATTGAAGTTGAGTTTCATAGGAGATTTATGGGATCAGAGTCAGAGAGACAGGCCAGGAGAATCTGACGCGTTTATGGTGTAA 1524 0.5302 MSSDESLRSLSMDYLNLLINGQAFSDVTFSVEGRLVPAHRCILAARSLFFRKFFCGPDTPSGLDLMGSGSRVNSATSPSSRPGVISVNSVGYEVFLLLLQFLYSGQVSVVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARSFGVEQLALLTQKQLASMVEKASIEDVMKVLLASRKQDMHQLWTTCSHLVAKSGLPPEVLTKHLPIDVVAKIEELRLKTSLVRRSLIPPHHHHDHITATADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNLDEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHLAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLAHIEPNKLRLCLELVQSAALVLSREEGNANPPSSTAIYPPMNEDHNSSSSNSNIANLNLDARLVYLNLGAAQMGSRLDGDEDSSHSSHQNRHGSQGGSRDQTMRHLRGQQLKLSFIGDLWDQSQRDRPGESDAFMV 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02682 507 SUPERFAMILY Ankyrin repeat 273 357 IPR036770 -
Accr2g02682 507 MobiDBLite consensus disorder prediction 447 473 - -
Accr2g02682 507 Pfam Ankyrin repeats (3 copies) 262 344 IPR002110 GO:0005515
Accr2g02682 507 Pfam BTB/POZ domain 16 112 IPR000210 GO:0005515
Accr2g02682 507 SMART BTB_4 25 164 IPR000210 GO:0005515
Accr2g02682 507 ProSiteProfiles BTB domain profile. 25 111 IPR000210 GO:0005515
Accr2g02682 507 FunFam regulatory protein NPR5 isoform X1 4 197 - -
Accr2g02682 507 FunFam regulatory protein NPR5 isoform X2 245 362 - -
Accr2g02682 507 SUPERFAMILY POZ domain 8 162 IPR011333 -
Accr2g02682 507 PANTHER BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 1 465 IPR044284 GO:0099402
Accr2g02682 507 SMART ANK_2a 279 309 IPR002110 GO:0005515
Accr2g02682 507 SMART ANK_2a 314 343 IPR002110 GO:0005515
Accr2g02682 507 ProSiteProfiles Ankyrin repeat region circular profile. 314 344 - -
Accr2g02682 507 CDD BTB_POZ_NPR_plant 8 164 - -
Accr2g02682 507 Gene3D Potassium Channel Kv1.1; Chain A 4 197 IPR011333 -
Accr2g02682 507 MobiDBLite consensus disorder prediction 398 424 - -
Accr2g02682 507 MobiDBLite consensus disorder prediction 395 424 - -
Accr2g02682 507 Gene3D - 246 362 IPR036770 -
Accr2g02682 507 Pfam Domain of unknown function (DUF3420) 199 256 IPR024228 -
Accr2g02682 507 ProSiteProfiles Ankyrin repeat profile. 314 346 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02682 Accr-Chr2 62619113 62621765 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Accr2g02682 BTB 1.2e-13 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02682 K14508 - cave:132192031 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02682 2 62619113 62621765 Accr5g01891 5 45227397 45229825 CCT
Accr2g02682 2 62619113 62621765 Accr2g02682 2 62619113 62621765 ECH