Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02625 ATGGGGAGAGGGAAAATTGAAATTAAGAAGATAGAGAATTTGAATAACAGGCAGGTCACCTTCTCAAAGCGACGTAATGGGCTGCTCAAGAAGGCCAAGGAGTTGTCTGTTCTGTGTGATGCAGAGGTTGCTGTCATCATTTTCTCCAGCACTGGCAAGCTTTATGAGTTCTCTAACACAAGCATGGAGCACACTCTTTCAAGGTACACCAAAGGCGTGGAATTGGACTCTACAGATCAGCCTTGTGCTTTGCCACCAGCTGAGGAGACTGGGCCTGATACAGACCTTCTAAAGGATGAAGTAAGAAAGCTTCGTTTAGGGTCCTTAAGAATGATGGGGAAGGAGCTGGAAGGGTTGAAATTTAAAGAGTTGCAGAACTTAGAAAATCAACTGAGTGAAGGGATACTATCTGTTAAAGAAAAGAAGGAACAAATACTTGTTGATCAACTTAGAAGGTCCAGATTGCAGGAGCAACAAGCCATGCTGGAGAATGAAGCTCTGCGCAAACAAATAGAGGAGATGCACAATAAAACAAAGACAGGACACTTTGTTTATTTGAATAGCTTAGAGAGCAGATACTGCAGCCCCATTTTGCACTGTGCCTCCCATGAAAGACATGACCTTTCTGACACTTCCTTGCAGTTAGGGTTGTCAACAGAATTTGGTCGCAAGAGGAAATCAATGAAAGCAGAACCCTGCAACGCCTCTGCATCGCAAAACACTCCTTAG 729 0.439 MGRGKIEIKKIENLNNRQVTFSKRRNGLLKKAKELSVLCDAEVAVIIFSSTGKLYEFSNTSMEHTLSRYTKGVELDSTDQPCALPPAEETGPDTDLLKDEVRKLRLGSLRMMGKELEGLKFKELQNLENQLSEGILSVKEKKEQILVDQLRRSRLQEQQAMLENEALRKQIEEMHNKTKTGHFVYLNSLESRYCSPILHCASHERHDLSDTSLQLGLSTEFGRKRKSMKAEPCNASASQNTP 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02625 242 Gene3D - 14 74 IPR036879 GO:0003677|GO:0046983
Accr2g02625 242 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Accr2g02625 242 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Accr2g02625 242 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Accr2g02625 242 SUPERFAMILY SRF-like 2 78 IPR036879 GO:0003677|GO:0046983
Accr2g02625 242 Coils Coil 124 144 - -
Accr2g02625 242 ProSiteProfiles K-box domain profile. 87 177 IPR002487 GO:0003700|GO:0005634|GO:0006355
Accr2g02625 242 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 163 - -
Accr2g02625 242 FunFam MADS-box transcription factor MADS-MC 13 81 - -
Accr2g02625 242 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Accr2g02625 242 Coils Coil 150 177 - -
Accr2g02625 242 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Accr2g02625 242 Pfam K-box region 95 171 IPR002487 GO:0003700|GO:0005634|GO:0006355
Accr2g02625 242 CDD MADS_MEF2_like 2 72 IPR033896 GO:0000977|GO:0045944
Accr2g02625 242 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Accr2g02625 242 MobiDBLite consensus disorder prediction 223 242 - -
Accr2g02625 242 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02625 Accr-Chr2 61982413 61986504 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02625 1 241 MADS-box Gene Family AT5G13790 46.154 1.21e-62 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Accr2g02625 K-box 3.9e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02625 - - gmx:100792278 327.02