Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02617 ATGGCTTCCTCTTCCTCTGACCCTAGCAAGTCTGAAGTTGGCTGCGGCGGCGGTGGCGGTAGTGCAGAGGTGTCGGATGCAGCGATGGCAAATGAAAAACTCTTAATCTACAGGGGATTGAAGAAAGCGAAGAAAGAAAGGGGGTGTACAGCTAAAGAGCGCATCAGCAAGATGCCTCCTTGTGCTGCGGGCAAACGCAGCTCCATATATCGTGGTGTCACCAGGCATAGATGGACTGGTCGTTATGAGGCTCATCTTTGGGATAAAAGTACATGGAACCAGAATCAGAATAAAAAGGGAAAACAAGTCTACTTGGGTGCATATGATGACGAGGAGGCTGCAGCTAGGGCTTATGACCTTGCTGCTCTGAAGTACTGGGGTCCAGGGACTCTAATAAACTTTCCAGTGACAGATTATACAAGAGATCTTGAAGAAATGCAAAATGTTTCAAGAGAGGAATACCTTGCATCATTACGGCGGAAGAGCAGTGGTTTTTCTCGAGGGATCTCTAAATATCGTGGACTCTCCAGCCGATGGGAGCCATCATATGGTAGAATGGCTGGATCTGATTACTTCAACAGTATACATTATGGGACAGGGGATAACTCAGCAGCAGAAAGTGAATATGTTAGTGGTTTCTGCATAGAACGAAAGATTGATTTAACAAATTACATCAAATGGTGGGGATCCAGTAAAAATCGCCAACATGATGCTGGAACAAAATTATCAGAAGAAAAAAAACAAGGATTTGCGGGAGATATTTGTGGTGAGCTCAAAACGCTGGGACAGGCACTCCAACCCACGGAACCATACCAGATGCCACGGTTAGGCTTGCCCCATGATAGGAAAAAGCATAAAAGTTCTGCTGTCTCTGCCTTAACTATTTTATCACGGTCAGCAGCCTACAAAAGCCTGCAAGAGAAAGCATCAAAGACACAAGAAAATTACACTGATAATGATGAGGATGAGAACAAAAATACCATCAATAAGTTGGACCATGGCAAGGCACTTGAGAGGTCACCAAATCATAATGGTGTGGATGAAAGGCTTGACATTGCGATGGGAATGAGCGGGGCATTGTCTATTCAAAGAAATGTTTACCCCTTGACTTCATTCTTGTCTGCACCACTTTTGACAGCCTATAATACCGCCGATCCCATGGTAGATCCTGTTCTCTGGACATCTCTTATTCCTATGCTTCCTGCTGGCCTTTCTCGGACAGCCGAGGTCACCAAGACCGAGAGTAGTTCAACTTACACCATATTTCAGCCAGAGGAGTGA 1281 0.4528 MASSSSDPSKSEVGCGGGGGSAEVSDAAMANEKLLIYRGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNVSREEYLASLRRKSSGFSRGISKYRGLSSRWEPSYGRMAGSDYFNSIHYGTGDNSAAESEYVSGFCIERKIDLTNYIKWWGSSKNRQHDAGTKLSEEKKQGFAGDICGELKTLGQALQPTEPYQMPRLGLPHDRKKHKSSAVSALTILSRSAAYKSLQEKASKTQENYTDNDEDENKNTINKLDHGKALERSPNHNGVDERLDIAMGMSGALSIQRNVYPLTSFLSAPLLTAYNTADPMVDPVLWTSLIPMLPAGLSRTAEVTKTESSSTYTIFQPEE 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02617 426 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 32 279 - -
Accr2g02617 426 SMART rav1_2 69 141 IPR001471 GO:0003700|GO:0006355
Accr2g02617 426 PRINTS Ethylene responsive element binding protein signature 117 137 IPR001471 GO:0003700|GO:0006355
Accr2g02617 426 PRINTS Ethylene responsive element binding protein signature 70 81 IPR001471 GO:0003700|GO:0006355
Accr2g02617 426 MobiDBLite consensus disorder prediction 313 344 - -
Accr2g02617 426 MobiDBLite consensus disorder prediction 1 22 - -
Accr2g02617 426 MobiDBLite consensus disorder prediction 307 344 - -
Accr2g02617 426 FunFam AP2-like ethylene-responsive transcription factor 68 137 - -
Accr2g02617 426 Gene3D AP2/ERF domain 69 137 IPR036955 GO:0003700|GO:0006355
Accr2g02617 426 SUPERFAMILY DNA-binding domain 68 136 IPR016177 GO:0003677
Accr2g02617 426 ProSiteProfiles AP2/ERF domain profile. 69 135 IPR001471 GO:0003700|GO:0006355
Accr2g02617 426 Pfam AP2 domain 69 127 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02617 Accr-Chr2 61824210 61827586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02617 30 410 AP2-EREBP Transcription Factor Family AT2G41710 65.464 1.25e-165 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr2g02617 AP2 1.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02617 K09285 - gmx:100786651 706.827