Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02602 ATGGGAACTCCCGAATTCCCAGATCTTGGAAAGCATTGCGCTGTTGATGATTGCAAGTTGATTGATTTCTTGCCCTTCACATGCGATCGTTGCAATCACGTATATTGTTTGGAGCACAGAGGTTATTCTAAACATCAGTGTCAGAAAGCGGATAGACTCGATGTCACTGTTGTCATATGTCCACTTTGTGCAAAAGGAGTTCGCCTAATTCCTGATCAAGATCCAAACATAACTTGGGAGAATCATGTAAACACTGAATGTGACCCATCAAATTATGAGAAAGCCATGAAGAAGAAAAAATGCCCTGCCCCTGGATGTAGAGAGGTCTTGGTGTTCTCAAACACAATCAAATGCAGGGATTGCTTGGTAGATCATTGTCTAAAGCATCGTTTTGGCCCTGATCACAAGTGTCCAGGGCCCAAAAGTTTGGAAACCAGCTTTTCATTTATGAATCTCTTGAGCAGAAGTAGAAAAGAAGAGTCAAAGCCAAATCCATCTCCACCTACATCCTCATCAAAATGGGCTTCGGGCTTTCGCAACGTGGCGTCAAATCTTCGAGCTTCAGCTGAAGCCAGCATGTCAAAATTGGGTAATGAAATTAACCAAGCTTGGCAAACAACAAAGGATGGGATGGGACAGAGCAGTGGTAGAGGTAATGAAAATGGGCAAGTGGAGATGGAGCAATGTCCTCAGTGTAATGCAAAGTTTTCGTCTGTCACTTCTTTGGTGGATCATGTACAGAAAGTTCATGAAAGAAGCAACATCCCATCCCGGGTGGCGAAGGTGACCATCGATGTCTGTCCCAAATGTAGCAGAGGATTTCGAGATCCAGTGGCTCTTGTGGAGCATGTTGAGAGGGATCACGGTGGTAGTTCAAGAGCCTAG 885 0.4452 MGTPEFPDLGKHCAVDDCKLIDFLPFTCDRCNHVYCLEHRGYSKHQCQKADRLDVTVVICPLCAKGVRLIPDQDPNITWENHVNTECDPSNYEKAMKKKKCPAPGCREVLVFSNTIKCRDCLVDHCLKHRFGPDHKCPGPKSLETSFSFMNLLSRSRKEESKPNPSPPTSSSKWASGFRNVASNLRASAEASMSKLGNEINQAWQTTKDGMGQSSGRGNENGQVEMEQCPQCNAKFSSVTSLVDHVQKVHERSNIPSRVAKVTIDVCPKCSRGFRDPVALVEHVERDHGGSSRA 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02602 294 MobiDBLite consensus disorder prediction 155 177 - -
Accr2g02602 294 SUPERFAMILY AN1-like Zinc finger 4 59 IPR035896 -
Accr2g02602 294 ProSiteProfiles Zinc finger AN1-type profile. 95 145 IPR000058 GO:0008270
Accr2g02602 294 ProSiteProfiles Zinc finger C2H2 type domain profile. 227 255 IPR013087 -
Accr2g02602 294 SMART AN1_Zf_4 101 142 IPR000058 GO:0008270
Accr2g02602 294 SMART AN1_Zf_4 13 52 IPR000058 GO:0008270
Accr2g02602 294 FunFam AN1-type zinc finger protein 2B isoform X1 3 64 - -
Accr2g02602 294 SUPERFAMILY AN1-like Zinc finger 57 142 IPR035896 -
Accr2g02602 294 ProSitePatterns Zinc finger C2H2 type domain signature. 229 250 IPR013087 -
Accr2g02602 294 Gene3D Classic Zinc Finger 194 293 - -
Accr2g02602 294 Gene3D - 2 56 IPR035896 -
Accr2g02602 294 Pfam C2H2-type zinc finger 228 250 - -
Accr2g02602 294 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 5 252 - -
Accr2g02602 294 SMART c2h2final6 265 288 IPR013087 -
Accr2g02602 294 SMART c2h2final6 227 250 IPR013087 -
Accr2g02602 294 ProSitePatterns Zinc finger C2H2 type domain signature. 267 288 IPR013087 -
Accr2g02602 294 ProSiteProfiles Zinc finger AN1-type profile. 7 55 IPR000058 GO:0008270
Accr2g02602 294 MobiDBLite consensus disorder prediction 163 177 - -
Accr2g02602 294 Gene3D - 80 150 IPR035896 -
Accr2g02602 294 ProSiteProfiles Zinc finger C2H2 type domain profile. 265 293 IPR013087 -
Accr2g02602 294 Pfam AN1-like Zinc finger 13 51 IPR000058 GO:0008270
Accr2g02602 294 Pfam AN1-like Zinc finger 101 140 IPR000058 GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02602 1 294 C2H2 Transcription Factor Family AT2G41835 64.765 1.60e-124 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr2g02602 zf-AN1 2.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02602 - - pcin:129293246 565.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02602 2 61651054 61654155 Accr2g02602 2 61651054 61654155 ECH