Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02591 ATGCCGCGATTTCAGTATCAACCCCTCACTCACACATCAAACATTGATCAGCAACTTGATTTATACTCAAGCATGCAACAAAAACTGGACCACACTGCAAAGCGTTGTGAATCAGATGTACGCAACAATAAACTATATAGTACCTGCTCTCAAGCTTGGTGGCATGACACAGGGCACGATGACTTGTCTAAAGAGGTGGCAGGGGAAGTCAAAATGAATTACTTCGTGCCTCAAAACTTGGATGCTAGTTTTGGGAACCTGACCAGTAATTCACAAGCTGTGACTCTTCTGGCTGAAGGGAGGGAAGCTGGCAAAGAGAAAGGTGGAGAAAAGTATGAAGAACATCAACAGAAACAATTTTCTGTCCGTACTATGCCTTCAACAGTAAATGAATTTCTTGTGCCACCTATACAGTCAGAGGTTGTGGGCCATTCGACAGCATGTGCATCTTACGCTTATCCAGATCCACATTATGGGAGAGCAATTCCTTCTTTTGGACCTCAGCCTTTGATACATCCTCCTAGTCTTGGAGTGCATTCTTCTAGAATGGTGTTACCACTGCAAATGGAAGAAGAACCTGTGTATGTTAATGCCAAGCAATACCATGGAATTTTGAGGCGCAGGCAATCCCGTGCCAAGGCTGAGCTTGAAAAGAAGGTTATAAAAGCGAGGAAGCCCTATCTGCACGAGTCTCGGCATTTGCATGCCTTGAGAAGAGCAAGAGGGTGTGGAGGCCGTTTTCTGACAACAAAGAGGGTTGATGGTACTGCTGCAAACACAGCAAACAAGAACCAGGATACTGTTAGTTCATACCACAAAGGCATGTCTTCCAATTTGCCTGCCATTGCTGAGTCAAATTCTGGTTCCCGAGATATCTTGAGTTCCCACCAATCAAACATGCACTCCAGCTCTAATGGCAACAACAATTATTACTCACAAGTTCAGGGATTAGAGCTGTCTGGTTATCGACCTCTCTCGACCGGGGCTCGCAGGGCCCTGACCATCAAATAA 1011 0.453 MPRFQYQPLTHTSNIDQQLDLYSSMQQKLDHTAKRCESDVRNNKLYSTCSQAWWHDTGHDDLSKEVAGEVKMNYFVPQNLDASFGNLTSNSQAVTLLAEGREAGKEKGGEKYEEHQQKQFSVRTMPSTVNEFLVPPIQSEVVGHSTACASYAYPDPHYGRAIPSFGPQPLIHPPSLGVHSSRMVLPLQMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKARKPYLHESRHLHALRRARGCGGRFLTTKRVDGTAANTANKNQDTVSSYHKGMSSNLPAIAESNSGSRDILSSHQSNMHSSSNGNNNYYSQVQGLELSGYRPLSTGARRALTIK 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02591 336 PRINTS CCAAT-binding transcription factor subunit B signature 224 247 IPR001289 GO:0003700|GO:0006355
Accr2g02591 336 PRINTS CCAAT-binding transcription factor subunit B signature 193 215 IPR001289 GO:0003700|GO:0006355
Accr2g02591 336 MobiDBLite consensus disorder prediction 278 309 - -
Accr2g02591 336 Gene3D - 190 251 - -
Accr2g02591 336 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 192 247 IPR001289 GO:0003700|GO:0006355
Accr2g02591 336 ProSitePatterns NF-YA/HAP2 subunit signature. 195 215 IPR018362 GO:0003677|GO:0016602
Accr2g02591 336 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 60 308 IPR001289 GO:0003700|GO:0006355
Accr2g02591 336 ProSiteProfiles NF-YA/HAP2 family profile. 190 250 IPR001289 GO:0003700|GO:0006355
Accr2g02591 336 SMART cbf3 189 250 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02591 Accr-Chr2 61501767 61506703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02591 120 280 CCAAT-HAP2 Transcription Factor Family AT5G12840 47.977 8.40e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Accr2g02591 CBFB_NFYA 4.1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02591 K08064 - qsa:O6P43_006531 258.455