Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02587 ATGAATCACTTAACTAATGAGACTGATGATGATTTTGCAAGCTTGCTTGAGCTTGCAGCTAATAATGATGTTGAGGGTTTTGAACGACTGATTGAGCGTGATCCATCCTGCGTTGATGAGGTTGGACTGTGGTATGGTCGCAGAAAGGGTTCAAAACTAATGGTCAATGAGCAGAGAACTCCTTTGATGGTTGCTGCCACTTATGGTAGCATTGATGTCATGAAGCTAATTCTATCACTATCCAATGCTAACGTAAATCGTCCTTGTGGCCTTGACAAGAGCACTGCACTTCATTGCGCTGCATCTGGTGGAGCTGCTACTGCGGTTGATGTTGTAAAACTGCTCTTATCAGCAGGTGTTGATCCAAGTTCCGTGGATGCCAATGGTCACCGTCCAGTTGACGTTATTGTTGTTCCTCCCACGCTTGATCATGTCAAAAACAGTCTTGAAGAACTTCTTCAAACTGATGACTCCATGGCAGGATTTAATCTTAGGGTTAACACAACCACATCAAAAGCTGATTCTCCTCCTTTATCAGCTTCACCAGAGAATGAGTTTCCATCTTCTGCACCAGATGTCCACTTGAAGTCAAAGTCAAATGATGCACCTGTTTCTCATGCATCAGAGAAGAAAGAGTATCCTGTTGATCCATCCCTTCCAGACATCAAGAACAGCATATATTCAACTGATGAATTCCGAATGTATTCTTTCAAGGTCCGGCCTTGTTCACGTGCTTATTCCCATGATTGGACTGAATGTCCTTTTGTCCATCCTGGAGAAAATGCCCGAAGAAGGGACCCAAGGAAGTTTCACTATAGCTGTGTTCCTTGTCCTGATTTTCGGAAGGGGGCTTGCCGACGTGGTGATATGTGTGAGTATGCACATGGAGTTTTTGAGTGTTGGCTGCATCCTGCTCAATATCGAACCCGTCTCTGCAAGGATGGGACACATTGCTCTAGAAGAGTTTGTTTCTTTGCCCACACTGCTGAGGAGCTTCGGCCTTTATATGTTTCAACTGGTTCTGCTGTTCCCTCTCCTCGTTCAAGCACATCTGCCATGGATTTTGCTGCAGCTATGAGCCTGTTGCCTGGCTCCCCTTCCTCTATGTCTGTCATCTCCCCATCACCATTCACTCCGCCTATGTCTCCATCTGCCAATGGCATGTCACACTCTTCAGCTGCTTGGTCGCAAGCCACTGTCCCATCCTCGCATTTGCCAGGAAGTAATCTTCATTGCAGTCATTTCAGATTGTCGCATAATGCCAGAGATATTCCTGTCGAAGACTTGGATTTGTTGCCAGAATATGAAGTTCAGCAACAGCAGGTCTTTAATGAGTTGTCTTGTCTTCCTCAACAACCAATGAATTCTAATAGCTTGAATCAGTTGGTTCGAATGAAGACCTTGACCCATCCAAACCTTGATGATCTATTTTGTGCTGAGAACTCTTCCCCTCGATTTGCTGATCCAGCAATGGCCTCAAGTGTTTACTCCCCAACGCACAAATCTGCTGTTCTTAATCAATTTCAGCAGCAGCAAAGCTTGCTATCACCTGTCAATACAAAATTTCCTTCCAAGAATGTTGATCATTCTTTTGCTGTTCAGTCAACAGGAAGGATGTCACCACGTAAAGTGGAACCTATTTCGCCGATGAGCTCCAGAATTTCTATGCTAGCTCAATGTGAGAAGATGCAACAATTCCGCAGCCTTAGCTCTCGGGAACTTGGTTCCAGCGCTGCGGCTGCTGTTGCTGGATCGTCAGTCAATTCTTGGTCCAAATGGGGTTCCCCCAACGGTAAGTTGGATTGGGCTGTCAGTAGCGATGATTTGGGTAAATTCCATAGAACATCTTCATTTGAGCTTGGGAACAATGGCGAGGAGCCTGACTTATCATGGGTGCAGACTCTAGTCAAAGAATCTCCAGCTGAGTTTAAAGAGCCGTCCACTAGTGTCCCAGGCATGGCAGTGGCGGGAACCTCTGGTGGGGAATCAAATATGAGCGCCCAAATCGAACTTGTTGACCATGCCTTATTGGGGGCATGGCTTGAACAAATGCAGCTTGATCATCTTGTGGCTCAGCAAAACTGA 2085 0.458 MNHLTNETDDDFASLLELAANNDVEGFERLIERDPSCVDEVGLWYGRRKGSKLMVNEQRTPLMVAATYGSIDVMKLILSLSNANVNRPCGLDKSTALHCAASGGAATAVDVVKLLLSAGVDPSSVDANGHRPVDVIVVPPTLDHVKNSLEELLQTDDSMAGFNLRVNTTTSKADSPPLSASPENEFPSSAPDVHLKSKSNDAPVSHASEKKEYPVDPSLPDIKNSIYSTDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTHCSRRVCFFAHTAEELRPLYVSTGSAVPSPRSSTSAMDFAAAMSLLPGSPSSMSVISPSPFTPPMSPSANGMSHSSAAWSQATVPSSHLPGSNLHCSHFRLSHNARDIPVEDLDLLPEYEVQQQQVFNELSCLPQQPMNSNSLNQLVRMKTLTHPNLDDLFCAENSSPRFADPAMASSVYSPTHKSAVLNQFQQQQSLLSPVNTKFPSKNVDHSFAVQSTGRMSPRKVEPISPMSSRISMLAQCEKMQQFRSLSSRELGSSAAAAVAGSSVNSWSKWGSPNGKLDWAVSSDDLGKFHRTSSFELGNNGEEPDLSWVQTLVKESPAEFKEPSTSVPGMAVAGTSGGESNMSAQIELVDHALLGAWLEQMQLDHLVAQQN 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02587 694 Pfam Ankyrin repeats (3 copies) 19 124 IPR002110 GO:0005515
Accr2g02587 694 MobiDBLite consensus disorder prediction 168 215 - -
Accr2g02587 694 Gene3D - 271 334 - -
Accr2g02587 694 PANTHER UNKEMPT FAMILY MEMBER 17 639 IPR045234 -
Accr2g02587 694 SMART ANK_2a 92 124 IPR002110 GO:0005515
Accr2g02587 694 SMART ANK_2a 57 87 IPR002110 GO:0005515
Accr2g02587 694 SMART ANK_2a 10 39 IPR002110 GO:0005515
Accr2g02587 694 Gene3D - 2 147 IPR036770 -
Accr2g02587 694 ProSiteProfiles Ankyrin repeat region circular profile. 92 126 - -
Accr2g02587 694 MobiDBLite consensus disorder prediction 168 186 - -
Accr2g02587 694 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 276 296 IPR000571 GO:0046872
Accr2g02587 694 FunFam Zinc finger CCCH domain-containing protein 66 229 297 - -
Accr2g02587 694 SUPERFAMILY Ankyrin repeat 14 137 IPR036770 -
Accr2g02587 694 ProSiteProfiles Zinc finger C3H1-type profile. 276 298 IPR000571 GO:0046872
Accr2g02587 694 SMART c3hfinal6 271 297 IPR000571 GO:0046872
Accr2g02587 694 SMART c3hfinal6 306 329 IPR000571 GO:0046872
Accr2g02587 694 ProSiteProfiles Ankyrin repeat profile. 92 127 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02587 Accr-Chr2 61457252 61459336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02587 7 687 C2H2 Transcription Factor Family AT5G12850 52.367 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Accr2g02587 Ank_2 4.8e-09 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02587 - - qsa:O6P43_006533 1056.97