Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02581 ATGGATTCTTGCAGAAAGTCTCCATTAAAGCCATGGAAGAAAGGGCCAAGCAGGGGGAAAGGTGGCCCTCAGAATGCAATGTGTGAGTACCGGGGCGTTCGCCAGAGAACGTGGGGAAAATGGGTTGCTGAGATTAGAGAACCGAAGAAGAGAACTAGGCTGTGGCTTGGTTCTTTTACCACAGCTGAAGAAGCTGCCATGGCTTATGATGAAGCTGCAAGGAGACTCTATGGTCCAGATGCTTACCTTAATCTTCCCCACCTTCAACCCAGCTCCAGCTCCACCATCAAATCTCAAAAGTTCAAATGGTTTCCTTCCAAGAATTTCATTTCGATGTTCCCTTCTTGTGGATTGCTCAACGTTAATGCTCAGCCTAGTGTTCATGTAATCCACCAGAAGCTACAACAACTCAAGCAGAATGAGGTTCCCAATCACACTCCCACCAGCTCATCCTGTGATCCAAAGGCTGAAGTTCAGATTATAGGAAGCAACCATAATGCAGACAATCCTCCAAATGAAAAAGAAGCTAAAACATCATCAGAAAGTATGCTTAGTGTTATTCAGGACAAACCCCAGATTGATCTCCATGAGTTTCTTCAACAGATGGGGGTACTAAAGGATGAAAAGCAGTCAGGAAGTTCCACAAAGTCTGAAGCTTTATCAAATGATTTCAGCGATAATTTTGGAGAATGTTCTGACAAGAGTATTAACTGGGAGGAATTAATGAAGATGCATGCAGTTGCAGATAATCAGGGATCAGAGGCAACTCAATTTCAAGCATATGACATAAATGAAGAACTTACTTTCACCACTTCGATTTGGGACTTCTAA 831 0.432 MDSCRKSPLKPWKKGPSRGKGGPQNAMCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFTTAEEAAMAYDEAARRLYGPDAYLNLPHLQPSSSSTIKSQKFKWFPSKNFISMFPSCGLLNVNAQPSVHVIHQKLQQLKQNEVPNHTPTSSSCDPKAEVQIIGSNHNADNPPNEKEAKTSSESMLSVIQDKPQIDLHEFLQQMGVLKDEKQSGSSTKSEALSNDFSDNFGECSDKSINWEELMKMHAVADNQGSEATQFQAYDINEELTFTTSIWDF 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02581 276 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Accr2g02581 276 Gene3D AP2/ERF domain 29 87 IPR036955 GO:0003700|GO:0006355
Accr2g02581 276 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
Accr2g02581 276 MobiDBLite consensus disorder prediction 162 183 - -
Accr2g02581 276 Pfam AP2 domain 28 78 IPR001471 GO:0003700|GO:0006355
Accr2g02581 276 FunFam Ethylene-responsive transcription factor 2 28 87 - -
Accr2g02581 276 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 4 242 - -
Accr2g02581 276 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Accr2g02581 276 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Accr2g02581 276 CDD AP2 28 88 IPR001471 GO:0003700|GO:0006355
Accr2g02581 276 MobiDBLite consensus disorder prediction 1 28 - -
Accr2g02581 276 SUPERFAMILY DNA-binding domain 29 87 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02581 Accr-Chr2 61416115 61416945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02581 5 276 AP2-EREBP Transcription Factor Family AT3G57600 49.821 1.41e-88 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr2g02581 AP2 8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02581 - - gmx:100801311 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02581 2 61416115 61416945 Accr5g01965 5 45966575 45967423 CCT
Accr2g02581 2 61416115 61416945 Accr2g02581 2 61416115 61416945 ECH