Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02577 ATGGCTGACCCTTACTCTCATCTTTTCCCTTCTCCTCCTTTCTTTCACCAATTCAACTCTAACCCTTCTTCTCACCACCACCATCCTTATGCTCTCCACAACTTCATCAACCACCCCACCGCCTCCTCCTCCGGCAGCTTTTTCCATCACCACCATGCCGTAGCTTCTTATTCTTCTATACCTTCATCACCGCCGTCTCCTCCTCTCAGAGAAGCCCTTCCTCTTCTGAGCCTCAGCCCCTCCACCAGGCAAGAGCATCAGGATTCTCATCATAATCAGGACTTGGATGATGTCAAGGTCGACGGTGGCGGCACGATCATCCTCCACGGTGCTAAACCCAAAGAGGAAGAAGAAGAGGAGGAGGAGGAGGAGGAAGAGGCCACCGTCACTGTTGCACTTCACATAGGGCTGCCCAGCCCTAGTGCTGCTGAGATGGCTTCTGTTCTCTCCTCTTGCAACCATAAAGAAGGGGGAGATGGCGGTGGCGGTGGAGGAGGAGGAGGCGGCGGAGATGGAGATCATGAGGATTATTGTTCTGGCTCCAGCGGGTTCATGCTGCACAATAAGCTCAACAAAGGACAGTACTGGATCCCTACTCCTTCACAGATTCTCATTGGTCCAACCCAGTTCTCTTGCCCTGTTTGCTTCAAGACCTTCAACAGATACAACAACATGCAGATGCACATGTGGGGGCATGGATCACAGTACAGAAAAGGGCCAGAATCACTGCGAGGAACACAACCAACGGGAATGTTAAGGCTTCCATGTTATTGTTGTGCACCAGGTTGCAGAAACAACATAGACCATCCAAGAGCGAAGCCACTGAAAGATTTTAGAACACTTCAAACGCATTACAAGAGGAAGCACGGGATCAAGCCCTTCATGTGCAGAAAATGTGGCAAGGCTTTTGCTGTAAGAGGAGATTGGAGAACTCACGAGAAAAATTGTGGAAAGCTCTGGTATTGTATCTGTGGCTCTGATTTTAAGCACAAGAGGTCTCTTAAGGATCATATCAAAGCCTTTGGAGTTGGTCATGCTGCTTATGGGATCGATGGCTTTGAAGAAGAAGATGACCCTGCCTCCGAAGTCGAGCAAGATAACGAGTCCACTCAGTAA 1116 0.4964 MADPYSHLFPSPPFFHQFNSNPSSHHHHPYALHNFINHPTASSSGSFFHHHHAVASYSSIPSSPPSPPLREALPLLSLSPSTRQEHQDSHHNQDLDDVKVDGGGTIILHGAKPKEEEEEEEEEEEEATVTVALHIGLPSPSAAEMASVLSSCNHKEGGDGGGGGGGGGGGDGDHEDYCSGSSGFMLHNKLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGVGHAAYGIDGFEEEDDPASEVEQDNESTQ 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02577 371 FunFam zinc finger protein WIP2-like 209 232 - -
Accr2g02577 371 ProSiteProfiles Zinc finger C2H2 type domain profile. 294 314 IPR013087 -
Accr2g02577 371 ProSitePatterns Zinc finger C2H2 type domain signature. 212 232 IPR013087 -
Accr2g02577 371 Gene3D Classic Zinc Finger 209 232 - -
Accr2g02577 371 PANTHER ZINC FINGER PROTEIN WIP2 41 368 IPR043584 GO:0003700|GO:0010468
Accr2g02577 371 SUPERFAMILY beta-beta-alpha zinc fingers 276 314 IPR036236 -
Accr2g02577 371 FunFam Zinc finger protein WIP2 263 345 - -
Accr2g02577 371 Gene3D Classic Zinc Finger 272 346 - -
Accr2g02577 371 ProSiteProfiles Zinc finger C2H2 type domain profile. 210 237 IPR013087 -
Accr2g02577 371 SMART c2h2final6 210 232 IPR013087 -
Accr2g02577 371 SMART c2h2final6 294 314 IPR013087 -
Accr2g02577 371 MobiDBLite consensus disorder prediction 80 101 - -
Accr2g02577 371 MobiDBLite consensus disorder prediction 153 173 - -
Accr2g02577 371 MobiDBLite consensus disorder prediction 84 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02577 Accr-Chr2 61324287 61326574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02577 1 371 C2H2 Transcription Factor Family AT3G57670 63.104 1.15e-151 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr2g02577 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02577 - - qsa:O6P43_010164 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02577 2 61324287 61326574 Accr5g01971 5 46018244 46020484 CCT
Accr2g02577 2 61324287 61326574 Accr2g02577 2 61324287 61326574 ECH