Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02572 ATGGAGCACACTGTAGGAGGTCTCGCTGGATTTAGTCTCAGCGATCAGGCCGCACTTGAAGCCATTCGATTCGACGAGGAAATTGAGCGAATCATAGCCCCAGCCCCAGAAAATGTCAGCTCCTTCACTGCACTTCTCGAATTACCCCCAGCGCAAGCCAAGGAGATCCTCCACTCGCCCAACTGTGACGGAGCCGCCGCTTCCGCCGCCGCCGCGATGGTCCCCGCATACGGTGAACAATCCTTCTGCCATATCAGCGATCAGAGACCCCACAAATTTCACTCTTTCAGTGGCACTTTAACACTCCCTTCTAACACTGCTTTGATCGAACGCGCTGCAAAGTTTTCAGTGTTTGCCGAAGAGAACTCGTCGCCGCAGGAACCTAACTTGGCTCCACTTAGTTCAGGAGCAAATTTGAACAGAGTAAAGCATGAACCCCCGGAAACCGATTCAAATCCTAAGCCAACCTCTGTTATCGCTTCTAACCCCTCGATTGAGTACAAGAATCAGAGGGCCACAAAGAGGAAGGAACGAGAGAAGAAGGTTAAAGAGTCCTCGAAGAAGAGGAAAAGCGGCGCCGACGAAGCATCCGGAGGCGGAGATAAACTTCCATACGTTCATGTTCGAGCTCGTCGAGGGCAAGCTACAGACAGCCATAGCTTAGCAGAAAGGGCCCGGAGAGAGAAAATCAACGCTCGCATGAAGATTTTACAAGAGCTGGTCCCTGGCTGCAATAAGATTTCAGGAACAGCATTAGTTCTGGATGAAATCATCAACCATGTTCAATCTCTTCAAAGCCAAGTGGAGTTCTTGTCAATGAAACTAGCAGCAGTTAACCCAAGAGTTGATTTCGACCTTGACAGCATATTGGCTGCCGAAGGTGCATCTCGAGTGGATTGCAACTTTCCCGACATGGTTACGCCTCCAGTGTGGCAGGAAGTTGCAGTCAATGGAAACAGGCAGCAATATCAACAACAGTGGCAAATCGATGCATTTAGCCAACCAATTTGGGTGAGGGAGGAAGAGAACCGTAATTTCATGACCCCAGAAAACTCTCCTGAGCTATGA 1068 0.4981 MEHTVGGLAGFSLSDQAALEAIRFDEEIERIIAPAPENVSSFTALLELPPAQAKEILHSPNCDGAAASAAAAMVPAYGEQSFCHISDQRPHKFHSFSGTLTLPSNTALIERAAKFSVFAEENSSPQEPNLAPLSSGANLNRVKHEPPETDSNPKPTSVIASNPSIEYKNQRATKRKEREKKVKESSKKRKSGADEASGGGDKLPYVHVRARRGQATDSHSLAERARREKINARMKILQELVPGCNKISGTALVLDEIINHVQSLQSQVEFLSMKLAAVNPRVDFDLDSILAAEGASRVDCNFPDMVTPPVWQEVAVNGNRQQYQQQWQIDAFSQPIWVREEENRNFMTPENSPEL 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02572 355 MobiDBLite consensus disorder prediction 169 196 - -
Accr2g02572 355 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 125 332 IPR024097 GO:0006355
Accr2g02572 355 MobiDBLite consensus disorder prediction 120 204 - -
Accr2g02572 355 MobiDBLite consensus disorder prediction 151 168 - -
Accr2g02572 355 CDD bHLH_AtBPE_like 204 289 - -
Accr2g02572 355 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 212 282 IPR036638 GO:0046983
Accr2g02572 355 MobiDBLite consensus disorder prediction 120 136 - -
Accr2g02572 355 FunFam transcription factor bHLH48-like isoform X1 211 283 - -
Accr2g02572 355 Gene3D - 211 283 IPR036638 GO:0046983
Accr2g02572 355 Pfam Helix-loop-helix DNA-binding domain 218 265 IPR011598 GO:0046983
Accr2g02572 355 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 214 264 IPR011598 GO:0046983
Accr2g02572 355 SMART finulus 220 270 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02572 Accr-Chr2 61170349 61175000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02572 18 347 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 52.125 9.94e-93 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr2g02572 HLH 6.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02572 - - pcin:129286268 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02572 2 61170349 61175000 Accr2g02572 2 61170349 61175000 ECH