Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02566 ATGGATTCCAATACCTTTCTCAATTATCAACACCAACGTCAGCCCAATTCTGGGTTGCTTCGGTTTCGCTCTGCCCCGACTTCGGTTCTTGCAAATTTCACTCAATCCCTTGCATCCGATCTCAGTAATGGAAATAATCCGTGGGAGGATTCTGAATCCGAGAAATTAATCTCTAGATTCGTAAATAACGACGGCCTGGATTCGTCTGGTTTCCAGGAATTCGAAGCCAAGCCCCCTAAAGCACAGACCGAGGCAACACTCAACCATATGAACTCCTATAATAATGGTTTGCCCCCTCACTACCCAAGGCAAAATTCCACCGCAAGTTCTGCAATGGATAGTTCCTATGGACTGGTGGAATCGTTGGGAGTGGATCCTCAAACGCAGCCCAAGAGCTTCACTACGAATCTTCTCAGGCAAAGCAGCTCCCCTGCTGGGCTTTTCTCGAACACTTCCTTTCCAAATGGGTATTCCACCGTTAAGGGTGTTGGAAACTATGGTGGGGCGAATGGCAGTAATGGTGAAGGGAGTCCATCGATGAGCATATTGAAGAATCAGCTTCGTTTCTTATCAAGAAGCAGTTCTTCCTTAGGAATGTTGTCACAGATATCTGAGATAGAGGGTGAGAGTATTGAAGCAACCAACCCTGACAATGGGTGCTTGGGATCTGTGAATGGTTATGTACCAGAATTTCCATACAGTTCCTGGAATGACGCGTCCCATCTCTCAGAAAATCTCGGTGGCTTGAAAAGAGAGCCAAGTAACAGTGAAAATTTATTTTCTAGTGCTCAGAATGGACCGCTCGGAAATCGGGTTCACATGTTATCTCATCACTTGAGTTTGCCAAAACCTTCGGCTGATATGGGTGTCATGGAGAAGTTTCTTCAATTCCCAGATTCTGTTCCTTGTAAGATAAGAGCGAAGCGAGGCTGCGCTACCCATCCTCGAAGTATTGCAGAAAGGGTAAGAAGAACACGGATCAGTGAACGAATGAGAAAAATTCAAGAGCTGGTCCCAAACATGGACAAGCAAACAAACACGGCAGACATGCTGGACTTGGCCGTTGAGTACATTAAAGATCTCCAAAAACAATTCAAGACTCTCAGTGAAAAAAAGGCAAACTGCAAATGTATGAGCACGCAGAAGGCAGACGCAAATCAAATGGTTTGA 1170 0.4538 MDSNTFLNYQHQRQPNSGLLRFRSAPTSVLANFTQSLASDLSNGNNPWEDSESEKLISRFVNNDGLDSSGFQEFEAKPPKAQTEATLNHMNSYNNGLPPHYPRQNSTASSAMDSSYGLVESLGVDPQTQPKSFTTNLLRQSSSPAGLFSNTSFPNGYSTVKGVGNYGGANGSNGEGSPSMSILKNQLRFLSRSSSSLGMLSQISEIEGESIEATNPDNGCLGSVNGYVPEFPYSSWNDASHLSENLGGLKREPSNSENLFSSAQNGPLGNRVHMLSHHLSLPKPSADMGVMEKFLQFPDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKIQELVPNMDKQTNTADMLDLAVEYIKDLQKQFKTLSEKKANCKCMSTQKADANQMV 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02566 389 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 314 378 IPR036638 GO:0046983
Accr2g02566 389 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 26 382 - -
Accr2g02566 389 Pfam Helix-loop-helix DNA-binding domain 316 362 IPR011598 GO:0046983
Accr2g02566 389 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 311 361 IPR011598 GO:0046983
Accr2g02566 389 FunFam Transcription factor bHLH130 family 312 381 - -
Accr2g02566 389 SMART finulus 317 367 IPR011598 GO:0046983
Accr2g02566 389 Coils Coil 358 378 - -
Accr2g02566 389 Gene3D - 312 387 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02566 Accr-Chr2 61126713 61128838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02566 1 372 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 49.239 1.37e-99 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr2g02566 HLH 3.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02566 - - qsa:O6P43_006556 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02566 2 61126713 61128838 Accr2g02566 2 61126713 61128838 ECH