Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02554 ATGGCTTACAGTGGTAACAAGAGCAACAACGAAACAAGCAGTGCGATGGAACCACTCCCACTCCCACCACCTCCACTGCTTCACCATCAAATTCATCAAGACCACCGAATCTCTTTCGGAATCATGCCATCTTCCTCCTCCTCCAATTTTCTAAGCAAGGACTCCGGAGCTTACGATTTAGGTGACTTGGATCAAGCGCTTCTTTTGTATCTCGACGGACAAGCCGACCCTTCCGCCATTAATGTTCAAGACCAAAGACCAGAGAACTCGTCATCGTCGGGAATGAGGCCTCCTACTCTCAACATTTTCCCCTCTCAGCCTATGCACGTCGACCCGCCTTCCTCCAGCAAGGCTGGCATGGAATTAGTTTCTCCACAAAGCAGTGGTTCCAAGAGACCATCGGAGCCGTCCATGAAGTTGTCTCACTCGCAAAACGACGCAGCCGCCGCCCCCGCCGCCCCTAATCAATCAGCCAAAGCTGTCAAGCGAGAGAGCACTCGTAAGGGCCCAACCTCAAGTTCTGAACAGGAGGGGCCTAAAACACCTGATCCTAAGACACTCAGAAGACTAGCTCAGAATAGAGAGGCAGCTAGGAAAAGCAGGCTTAGAAAAAAGGCATATGTGCAGCAGCTAGAGTCAGGTAGGATCAGGCTGAATCAGCTCGAACAAGAATTGCAGCGTGCTAGAGCTCAAGGCATATTCTTTGGAGGATCGGGTGCAGTTTTGGGAGGAGAGCAAGGCCTTCCCGTCGCTATGAGTACCATTAGCCCAGATGCTGCCATGTTCGACGTGGAATACGGGAGATGGGTGGAAGAGCACCACCGGCTAGTGTGTGAGCTGAGGGCGGCGGTTCAAGAGCACCTGCCGGAGAACGAGCTAAGGCTGTTTGTGGACAACTGTCTAGCTCATTATGACCAAGTTATGAACCTCAAGAGCATAGTGGCTAAAACGGACGTCTTCCACCTTGTTTCTGGCATGTGGAAGACTCCCGCCGAGCGTTGCTTCATGTGGATGGGTGGATTCAGGCCCTCTGAACTCATCAAGATAATTCTAAATCAAATAGAGCCGCTGACGGAGCAACAAATACTTGGGATCTGTGGATTGCAACAATCCACACAGGAGGCAGAAGATGCTCTCTCACAAGGGCTGGAAGCTCTGAATCAATCTCTCTCGGAAACCATAACGTCAGACTCATTGAGCACTACACCTAATATGGCCAACTACATGGGACAAATGGCCCTGGCCATCAACAAGCTCTCCAACCTCGAAGGTTTCGTCCGACAGGCGGATAGTCTTCGGCACCAAACGATTCACCGTCTGCATCAGATGCTAACGACGCGTCAAGCGGCGAGGTGTTTGCTGGCCATGGCGGAGTACTCTTATCGTCTGAGAGCCCTCAGCTCTCTGTGGGTGGCTCGTCCCCGCCAGGATTAA 1434 0.5195 MAYSGNKSNNETSSAMEPLPLPPPPLLHHQIHQDHRISFGIMPSSSSSNFLSKDSGAYDLGDLDQALLLYLDGQADPSAINVQDQRPENSSSSGMRPPTLNIFPSQPMHVDPPSSSKAGMELVSPQSSGSKRPSEPSMKLSHSQNDAAAAPAAPNQSAKAVKRESTRKGPTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESGRIRLNQLEQELQRARAQGIFFGGSGAVLGGEQGLPVAMSTISPDAAMFDVEYGRWVEEHHRLVCELRAAVQEHLPENELRLFVDNCLAHYDQVMNLKSIVAKTDVFHLVSGMWKTPAERCFMWMGGFRPSELIKIILNQIEPLTEQQILGICGLQQSTQEAEDALSQGLEALNQSLSETITSDSLSTTPNMANYMGQMALAINKLSNLEGFVRQADSLRHQTIHRLHQMLTTRQAARCLLAMAEYSYRLRALSSLWVARPRQD 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02554 477 FunFam BZIP family transcription factor 184 233 - -
Accr2g02554 477 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 188 203 IPR004827 GO:0003700|GO:0006355
Accr2g02554 477 ProSiteProfiles DOG1 domain profile. 259 473 IPR025422 GO:0006351|GO:0043565
Accr2g02554 477 MobiDBLite consensus disorder prediction 81 100 - -
Accr2g02554 477 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 183 227 IPR004827 GO:0003700|GO:0006355
Accr2g02554 477 CDD bZIP_HBP1b-like 185 237 - -
Accr2g02554 477 MobiDBLite consensus disorder prediction 81 188 - -
Accr2g02554 477 MobiDBLite consensus disorder prediction 119 151 - -
Accr2g02554 477 Pfam bZIP transcription factor 185 213 IPR004827 GO:0003700|GO:0006355
Accr2g02554 477 SUPERFAMILY Leucine zipper domain 185 226 IPR046347 GO:0003700|GO:0006355
Accr2g02554 477 PANTHER TRANSCRIPTION FACTOR TGA9 100 476 - -
Accr2g02554 477 MobiDBLite consensus disorder prediction 1 16 - -
Accr2g02554 477 Coils Coil 204 231 - -
Accr2g02554 477 MobiDBLite consensus disorder prediction 1 28 - -
Accr2g02554 477 SMART brlzneu 181 255 IPR004827 GO:0003700|GO:0006355
Accr2g02554 477 Pfam Seed dormancy control 277 351 IPR025422 GO:0006351|GO:0043565
Accr2g02554 477 Gene3D - 184 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02554 Accr-Chr2 61030487 61036465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02554 49 477 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 64.062 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Accr2g02554 DOG1 1.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02554 K14431 - gmx:100799713 699.508