Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02547 ATGGGTTCGTCCTCCACTCGCTGCCTTCACGGCTTGAAAGTTGGCCACAATGTCTACTTTGAGGATGTGACTGTCGGAGCTCAGCCCAAATCCACCGCTGGTCGGCGCTCCTCTTCATCTGGGACGGGAATGAAGAAGGGAAAGGGTGGTACTGTTCAAGGAGCTCAGCCTCCAAGGTGTCAGGTTGAGGGCTGCAAGGTTGATCTGAGTGACGCCAAGGCTTACTATTCCAGGCATAAAGTCTGTGGCTTTCACTCTAAATCCCCTAAAGTAATTGTTGCTGGTCTTGAACAAAGGTTTTGCCAACAATGCAGCAGATTTCATCAGCTTACTGAATTTGATCTGGAAAAACGAAGTTGCCGCAGGCGTCTTGCAGGCCATAATGAACGTCGGCGAAAGCCCCAACCTAGCTCCTTGTTGATCTCCCCCTATGCCAGATTTTCACCAGCTGTATTTGATAACCGGGGCAAAGTAGGTGGCTTTCTGATGGAATTTGCTGCAGACCATAAGCCAACTCTGAGGAATGAGTTGCCAGCAGCATCATCAATGGAGCAAGTTGCTGGCTATCAAAGTTGGGTGGGCAAGATAAACAGCTTTGGTCCCAGAAATCCTCCCGGGGAATGCTTCACCGGAATTGCAGACACAAGCTGTGCTCTCTCTCTTCTGTCAAATCAAACATGGGGCCTCAGGAACACACCGCCAGCTCTTGGAGTGAACAACTTATGCTTTGGAGGGACATCCATCACACAAGTTGCTGCATCCTCTCATGGTGATCCCATTCCCATCCATCACCTTTCAGATGCCTCATGGTCTTTTAAAGGCATTGGACGAAATATTTGTTTGCATGATGAGGTTGTTCCTGATCTTGGTCCGGCTCAGATTTCACTGTCTAATTGTGAACTTCCTGGAGAGCTTGTGATGCCACAGTCTGGCCGGAGGCAATATATTGATCCACAATCTGAAGCCTATGAGTCTTCTCAGCTGATGCACTGGTCACTTTGA 1002 0.49 MGSSSTRCLHGLKVGHNVYFEDVTVGAQPKSTAGRRSSSSGTGMKKGKGGTVQGAQPPRCQVEGCKVDLSDAKAYYSRHKVCGFHSKSPKVIVAGLEQRFCQQCSRFHQLTEFDLEKRSCRRRLAGHNERRRKPQPSSLLISPYARFSPAVFDNRGKVGGFLMEFAADHKPTLRNELPAASSMEQVAGYQSWVGKINSFGPRNPPGECFTGIADTSCALSLLSNQTWGLRNTPPALGVNNLCFGGTSITQVAASSHGDPIPIHHLSDASWSFKGIGRNICLHDEVVPDLGPAQISLSNCELPGELVMPQSGRRQYIDPQSEAYESSQLMHWSL 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02547 333 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 27 244 IPR044817 GO:0003677
Accr2g02547 333 FunFam Squamosa promoter-binding-like protein 14 51 121 - -
Accr2g02547 333 SUPERFAMILY SBT domain 58 139 IPR036893 GO:0003677|GO:0005634
Accr2g02547 333 Gene3D - 50 121 IPR036893 GO:0003677|GO:0005634
Accr2g02547 333 MobiDBLite consensus disorder prediction 30 46 - -
Accr2g02547 333 Pfam SBP domain 60 133 IPR004333 GO:0003677
Accr2g02547 333 MobiDBLite consensus disorder prediction 29 56 - -
Accr2g02547 333 ProSiteProfiles Zinc finger SBP-type profile. 57 134 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02547 Accr-Chr2 60978551 60981054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02547 12 333 SBP-box Gene Family AT3G57920 39.437 2.46e-56 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Accr2g02547 SBP 6.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02547 - - gmx:100807165 361.688