Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02544 ATGAACCAGAACATGGTTGATTTCTCAGTGCGAGTTCAAGTTCAGCAGAGCCACGGCCTAAACGGGGATTCTAATTCTGAATTTGGTAATAGTTATTGCGAATACATGGATATCAATCAGGCCTGGAATATGGGAAGTTGCAGCCAAACACTGGCCGTCGCCGGAGGAGGAGGAGGGGCCCACCAACAACCACCACCACCAAACCAAGGCCCTGCAAAATCCTCCGCCACCATCATGAGCCGTTTTGAATCTCCAGCTTCTGCTTTTTACGCCACGGAACGATGCATGGGGTTTCAGGTTCAACAACATGATTCCCAGCTTGGAACTAATCCTTCTTTGACCTCTCAGTTTTCCAAGATGAACGACTTGGATTTCCCTCTTTATCAATCTGACCCCAGCTTTGAATTCTCCAATACCCTCCAAGCAATGGTGAAATCTCCATTGAGTAGTAGTAACCATTACAGTAGATTCCCAGGAAAATCCAATAAGTTTTCTTACGGGAATTTGCCCACCACCAAGTTTCTTCCTATTCAACAACACAGCTTGTTTATTAACGATGTTGCCTCAGTTAAGAGAAATCAAGATCATACGGCAAGTGCATATAATTTACATGTTGATCAGATGAGTTTCTCTTCTTCTCAGCAAGAGAAGCTGACCCCGCCAGTTACATCAGAAGGGAGTGTGTCAGCTGTTTCTGGCAACCAGGGTACCAATGGGACAGCAGCCACATCATCAAGCAAAACACGTATTAGGTGGAACCAGGATCTTCATGAGAAGTTTGTTGAGTGTGTGAATCGCCTTGGAGGTTCTGAAAAGGCGACACCAAAAGCTATATTGAAGCTGATGGACTCTGATGGACTGACCATCTTCCATGTGAAGAGTCATTTGCAGAAATATAGAATTGCAAAATACATGCCAGACTCAGCTCAAGGAAAATCTGATAAAAGACCCACTGGAGAAGATGTGCATCATCTTGACACCAAAACTGGGTTGCAGATAAGAGAGGCACTTCAGCTGCAGTTAGATGTTCAAAGGCGCCTTCATGAACAGCTAGAGATTCAGAGGAAGTTGCAGGTGAGAATTGAGGAACAGGGGAGGCAGCTGAAGATGATGTTTGATCAGCAGCAAAAGACTAGTAGTGATAGCCTCTTGAATGCATAG 1161 0.4488 MNQNMVDFSVRVQVQQSHGLNGDSNSEFGNSYCEYMDINQAWNMGSCSQTLAVAGGGGGAHQQPPPPNQGPAKSSATIMSRFESPASAFYATERCMGFQVQQHDSQLGTNPSLTSQFSKMNDLDFPLYQSDPSFEFSNTLQAMVKSPLSSSNHYSRFPGKSNKFSYGNLPTTKFLPIQQHSLFINDVASVKRNQDHTASAYNLHVDQMSFSSSQQEKLTPPVTSEGSVSAVSGNQGTNGTAATSSSKTRIRWNQDLHEKFVECVNRLGGSEKATPKAILKLMDSDGLTIFHVKSHLQKYRIAKYMPDSAQGKSDKRPTGEDVHHLDTKTGLQIREALQLQLDVQRRLHEQLEIQRKLQVRIEEQGRQLKMMFDQQQKTSSDSLLNA 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02544 386 Gene3D - 246 305 - -
Accr2g02544 386 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 222 381 IPR044848 GO:0003700
Accr2g02544 386 Pfam MYB-CC type transfactor, LHEQLE motif 331 378 IPR025756 -
Accr2g02544 386 Coils Coil 334 354 - -
Accr2g02544 386 FunFam Myb family transcription factor 246 304 - -
Accr2g02544 386 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 244 304 IPR017930 -
Accr2g02544 386 NCBIfam myb-like DNA-binding domain, SHAQKYF class 247 302 IPR006447 GO:0003677
Accr2g02544 386 MobiDBLite consensus disorder prediction 212 248 - -
Accr2g02544 386 SUPERFAMILY Homeodomain-like 245 301 IPR009057 -
Accr2g02544 386 MobiDBLite consensus disorder prediction 53 76 - -
Accr2g02544 386 Pfam Myb-like DNA-binding domain 251 300 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02544 Accr-Chr2 60942635 60944396 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02544 241 377 G2-like Transcription Factor Family AT3G04450 58.156 3.68e-51 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr2g02544 Myb_DNA-binding 6.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02544 - - gmx:100527766 434.106