Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02526 ATGGGGGAAGAGACATCGGACGCAATGAACCTTGATTTGAATCTGGGTCCTGATCCAGAGCCAGCTGCTGGCTCCATAACCAATGAATCCGTGAGCTTAGAGGATTGGATTGAAGAACCTAGGGTCACTGAAGCAGTTAGACATAGGACTCGACAGAGGTGGAGATGGCGGCATCTTCACATTAATCATCCTGAACCCCATGGTAGCCTTTTTATTTCACCTGAGGCACATAGGGGTTTTATTATGCCGCCTGAAGCCCAACATATTTCAATGCGATTGAATCATTTGTTGGCCAGCCCTGGTAATGGAAGTGCGTTGCAGACTGGGGAAGGCAGCGTGGCAGCTGAAGAAAGAACAGAGGTGACACCAAAAGCATGTGACACAAACTATGGTGTTACAGAGGATGAAGCATCGGATAAGAAGGATGATGTTGAAAAGGGTAGTGGCAATGATGGGAGCTTTTTTGATTGTAATATCTGTTTGGACCTGGCTAGAGATCCTGTTGTGACTTGCTGTGGTCATTTGTTTTGTTGGCCATGCCTCTATCGGTGGCTACATGTCCATTCAGAAGCTAAGGAATGTCCAGTTTGCAAGGGAGAGGTAACACTTAAAAATGTTACACCAATTTATGGTCGTGGAAACAATGTCCGTGAACCTGAGGAAGATCCTACTCTTAAAGTCCCTCTTAGACCCCATGCTAGGCGTGTTGAAAGTCTGAGACAAACCATTCATCGAAATGCATTTGCATTCCCAGTGGAAGAGATGATTCGGCGTCTTGGAAATAGATTAGATCTCTCTCGAGATGTAGGCCAGCCAAATGAACCTGACAATGCCCAGGAAGCAGCTGACAGAACCACTACCTTGCTAAATAGATTTTTGACCTCTCGAGGTTTACGGAGAGAGCATAGTCATGGGGCAGCTGCAGATGATGTAGTGGACTTAACTCAAAACAACATCAGTGGTCCTGAGGTAGGGGATAACCGCAGGGTTCAATCCTTTTCCCTTCGAAGATCACAGTCTCATAGAACGACACTTTCTTCTCTTTCATCAGCTCTGAGTTCTGCAGAGAGATTTGTTGAGGCATATATCCGTAATCATTCTAGTGCTAGAAACCAAGAGCAGCCTCCTCCGGTTGATGACAGAGACTCCTTTTCAAGTGTTGCTGCTGTTATACACTCAGAGAGTCAAGTAGACACTGCTGTAGAAATTGACTCCATGGTGTCCTTGTCAACATCCTCTTCCAGGAGGAGAAATGACGCATCTCGGGTTTCTGATGTGGATAGCGGAGATTCTCGGGCTCCCAGGCGAAGACGTTTGAACTGA 1323 0.4633 MGEETSDAMNLDLNLGPDPEPAAGSITNESVSLEDWIEEPRVTEAVRHRTRQRWRWRHLHINHPEPHGSLFISPEAHRGFIMPPEAQHISMRLNHLLASPGNGSALQTGEGSVAAEERTEVTPKACDTNYGVTEDEASDKKDDVEKGSGNDGSFFDCNICLDLARDPVVTCCGHLFCWPCLYRWLHVHSEAKECPVCKGEVTLKNVTPIYGRGNNVREPEEDPTLKVPLRPHARRVESLRQTIHRNAFAFPVEEMIRRLGNRLDLSRDVGQPNEPDNAQEAADRTTTLLNRFLTSRGLRREHSHGAAADDVVDLTQNNISGPEVGDNRRVQSFSLRRSQSHRTTLSSLSSALSSAERFVEAYIRNHSSARNQEQPPPVDDRDSFSSVAAVIHSESQVDTAVEIDSMVSLSTSSSRRRNDASRVSDVDSGDSRAPRRRRLN 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02526 440 MobiDBLite consensus disorder prediction 309 329 - -
Accr2g02526 440 MobiDBLite consensus disorder prediction 1 22 - -
Accr2g02526 440 CDD RING-HC_AtRMA-like 155 198 - -
Accr2g02526 440 MobiDBLite consensus disorder prediction 407 440 - -
Accr2g02526 440 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 129 241 IPR013083 -
Accr2g02526 440 FunFam E3 ubiquitin-protein ligase RMA3 125 246 - -
Accr2g02526 440 MobiDBLite consensus disorder prediction 418 440 - -
Accr2g02526 440 ProSitePatterns Zinc finger RING-type signature. 172 181 IPR017907 -
Accr2g02526 440 MobiDBLite consensus disorder prediction 313 329 - -
Accr2g02526 440 Pfam Zinc finger, C3HC4 type (RING finger) 157 197 - -
Accr2g02526 440 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 135 338 IPR045103 GO:0005783|GO:0006511|GO:0061630
Accr2g02526 440 SMART ring_2 157 197 IPR001841 -
Accr2g02526 440 SUPERFAMILY RING/U-box 153 210 - -
Accr2g02526 440 ProSiteProfiles Zinc finger RING-type profile. 157 198 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02526 Accr-Chr2 60737056 60738378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02526 1 431 C3H Transcription Factor Family AT3G58030 52.339 3.24e-133 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02526 K10666 - gmx:100811099 608.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02526 2 60737056 60738378 Accr2g02526 2 60737056 60738378 ECH