Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02524 ATGGAGTTGGCCTTGAGCTTAGGGGACACACCCAAGCCCTTCTCTTTTCTTGACAAGCTCACCAGCATGCCCCGCCAGGACCCTGCCTTCTGCATGCCACTCGCCGCCGCCGCCGCTTTCGCTCCCAAAACATGTAATCATCATACGCAAGCCCATGAAGATGGTCGTACTTCATCTGCTCCGCCTCTTCAGCTCCATCTTCCTTCGGACCCTCCACGCCTTTCTATTCCTTGGCTCGCCCGTCCCTTGGGCGGTGAAGAGATTTCATCTGATAGAGCAGTGACTGCGAGGGGATTGGATGTGAACAGTGCTCCCGCAGACGTAGATGAGGCCGACGACGCCGCTGCACTCTCATCTCCCAACAGTGAGATCTCGTCATTTCACTTGGATTTCCGCCTCAGAAATGGTCACGGCTCCGGCGCTTACAAGAGAGAGCACGAGGCCAACGCCGACAGACCCAGCGACGATGACGAAAACGGATCAAATCGCAAGAAACTCCGACTATCTAAGGAACAGTCTGCCTTCCTGGAAGAGAACTTCAAAGAGCACGCCACCCTCAATCCCAAGCAGAAACTTGCCCTGGCGAAGCAATTAAACCTTCGTCCTCGTCAAGTGGAAGTTTGGTTCCAAAATAGACGGGCTAGGACGAAGTTGAAGCAGACGGAAGTAGACTGTGAGTATTTGAAGAGATGCTGCGAGACGCTGACGGAGGAGAATAGGAGGCTACAGAAGGAGGTGCAGGAATTAAGGGCTTTAAAGACATCGCAGCCGTATTACATGCAGCTTCCGGCCACCACTCTCACCATGTGTCCCTCCTGTGAAAGGGTCGTTACCAAATCTTCAGCCGCCGGCACCACAGCCACCGCGGGGGCAACTGCCCCTAGTACAAGCAGTGCTTCTCGAATCCCAGTAGCTTTGTCTCTCGGAAAGCCTGGAATGCTTCCCTTCCCCAACGGTCAGGCCCAAGCCCATCATACGCCTTCGTGA 987 0.5471 MELALSLGDTPKPFSFLDKLTSMPRQDPAFCMPLAAAAAFAPKTCNHHTQAHEDGRTSSAPPLQLHLPSDPPRLSIPWLARPLGGEEISSDRAVTARGLDVNSAPADVDEADDAAALSSPNSEISSFHLDFRLRNGHGSGAYKREHEANADRPSDDDENGSNRKKLRLSKEQSAFLEENFKEHATLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKEVQELRALKTSQPYYMQLPATTLTMCPSCERVVTKSSAAGTTATAGATAPSTSSASRIPVALSLGKPGMLPFPNGQAQAHHTPS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02524 328 Gene3D - 167 217 - -
Accr2g02524 328 SMART halz 219 262 IPR003106 GO:0006355|GO:0043565
Accr2g02524 328 MobiDBLite consensus disorder prediction 281 304 - -
Accr2g02524 328 MobiDBLite consensus disorder prediction 138 164 - -
Accr2g02524 328 Pfam HD-ZIP protein N terminus 86 127 IPR006712 GO:0005634
Accr2g02524 328 SMART HOX_1 161 223 IPR001356 GO:0003677
Accr2g02524 328 ProSitePatterns 'Homeobox' domain signature. 194 217 IPR017970 GO:0000981|GO:0006355
Accr2g02524 328 Pfam Homeobox associated leucine zipper 219 253 IPR003106 GO:0006355|GO:0043565
Accr2g02524 328 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 54 296 - -
Accr2g02524 328 ProSiteProfiles 'Homeobox' domain profile. 159 219 IPR001356 GO:0003677
Accr2g02524 328 Pfam Homeodomain 163 217 IPR001356 GO:0003677
Accr2g02524 328 FunFam Homeobox-leucine zipper protein HAT22 167 213 - -
Accr2g02524 328 MobiDBLite consensus disorder prediction 281 303 - -
Accr2g02524 328 Coils Coil 225 255 - -
Accr2g02524 328 CDD homeodomain 163 220 IPR001356 GO:0003677
Accr2g02524 328 SUPERFAMILY Homeodomain-like 153 220 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02524 Accr-Chr2 60713466 60714786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02524 71 275 Homeobox Transcription Factor Family AT3G60390 57.589 1.18e-71 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Accr2g02524 Homeodomain 5.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02524 K09338 - qsa:O6P43_005825 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02524 2 60713466 60714786 Accr5g02022 5 46582993 46584294 CCT
Accr2g02524 2 60713466 60714786 Accr2g02524 2 60713466 60714786 ECH