Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Accr2g02513 | ATGTCAAAGAGAGGTCCCGGTGGTTCGTCCGGAAACAAGTTCCGAATGTCACTAGGTCTACCGGTGGTGGTGACAGTCAACTGCGCCGATAACACTGGAGCTAAGAATCTGAACATCATTTCGGTGAAGGGGATCAAGGACCGCCTTAACCATTTGCCGTCTGCTTGCGTTGGTGACATGGTCATGGCCACTGTGAAGAAAGGGAAGCCTGATCACCGGAAGAAGGTCTTGCCCGCCGTGGTCGTACGCCAGTAG | 255 | 0.5373 | MSKRGPGGSSGNKFRMSLGLPVVVTVNCADNTGAKNLNIISVKGIKDRLNHLPSACVGDMVMATVKKGKPDHRKKVLPAVVVRQ | 84 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Accr2g02513 | 84 | SMART | Ribosomal_L14_2 | 19 | 84 | IPR000218 | GO:0003735|GO:0005840|GO:0006412 | |
| Accr2g02513 | 84 | Gene3D | Ribosomal protein L14 | 1 | 84 | IPR036853 | GO:0003735|GO:0005840|GO:0006412 | |
| Accr2g02513 | 84 | PANTHER | 50S/60S RIBOSOMAL PROTEIN L14/L23 | 20 | 84 | IPR000218 | GO:0003735|GO:0005840|GO:0006412 | |
| Accr2g02513 | 84 | SUPERFAMILY | Ribosomal protein L14 | 11 | 84 | IPR036853 | GO:0003735|GO:0005840|GO:0006412 | |
| Accr2g02513 | 84 | Pfam | Ribosomal protein L14p/L23e | 24 | 84 | IPR000218 | GO:0003735|GO:0005840|GO:0006412 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Accr2g02513 | Accr-Chr2 | 60573480 | 60573734 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Accr2g02513 | 1 | 84 | Cytoplasmic Ribosomal Protein Gene Family | AT1G04480 | 89.286 | 1.06e-48 | 149 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Accr2g02513 | K02894 | - | qsu:111999551 | 149.828 |