Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02503 ATGAGAACTTCATGGGCAGATTCTGTCGACAACTCAGCCGATGGTCCTCCAAGTGCCAATGCCGTGCGTCCTTCTCGATCAGCATATGTTCCACCACATCTTCGTAATAAGCCACCATCTTCAGAACCCCCTTTGACATCACACCCATCTTCGTTACCGGCCAGTGATCGGACAAATTTTGTTGGGTCAACTGCTGGGTACCGCGGAGGCAGTTCCTTTAACAAACCTGACTATGGAAGGCAGGACTATGGTTCTGGTGGTCGAATTGGTGGGGGCTGGAACAATAGAGGCGGAGGGTGGGACCGTGGAAGGGAGCGTGAGGTTAACCCATTTGAGAGTGATGAAGCTACAGATCATACTCTTAGTGAGCAAGAAAACTCAGGCATTAACTTCGACGCTTATGATGATATCCCTGTGGACACCAGTGGGGAGAATGTGCCTCCCCCTGTGAATACTTTTGCTGAAATAGACTTGGGCGAGGCATTGGATCAAAATATAAAGAGGTGTAAATACGTCAAACCTACTCCAGTTCAGAGGTACGCCATACCAATTTCTCTTGCGGGGCGAGATCTGATGGCTTGCGCCCAGACAGGATCAGGCAAGACAGCTGCCTTCTGTTTTCCTATCATAAATGGAATTCTGAGGATGTCACATGTTCAAAGACCACGTGTAGCACGAACTGCTTTCCCTCTAGCTCTTATCCTATCTCCTACCCGGGAGCTTTCATGTCAGATACATGACGAGGCTAAAAAGTTTTCCTATCAAACTGGTGTTAAGGTGGTAGTTGCTTACGGCGGAGCACCAATAGTTCAACAGTTGCGGGAGCTTGAGAGAGGAGTTGATATTCTTGTGGCAACTCCAGGACGTCTGGTAGATTTGTTAGAGAGGGCTAGGGTGTCACTGCAAATGATCAGATATTTAGCTCTCGATGAGGCAGATCGGATGCTGGATATGGGTTTTGAGCCTCAAATAAGAAAAATAGTTGAACAAATGGACATGCCTCTTCAAGGCATGAGACAAACAATGCTGTTTAGTGCCACTTTTCCGAAAGAGATACAGAGACTTGCGTCAGATTTCCTTGACAATTATGTGTTTCTGGCTGTTGGAAGGGTTGGTTCAAGTACTGACCTAATTGCTCAACGAGTGGAATATGTCCTGGAATCTGACAAAAGAAGCCACCTCATGGACCTTCTTCACGCCCAGAAGGAAAATGGAATTTATGGAAAGCAAGGTCTGACATTAGTTTTTGTGGAAACAAAGAAAGGAGCTGATGCACTGGAACACTGGCTGTGCATTAATGGGTTTCCTGCTACTAGCATTCATGGTGACCGATCACAGCAGGAAAGGGAACTGGCGTTGAGGTCGTTCAAGAGTGGAAACACACCAATTTTAGTGGCAACAGATGTTGCAGCACGTGGGCTTGATATTCCACGTGTAGCTCATGTAGTAAATTTTGATCTTCCCAATGACATTGATGATTATGTGCATCGGATTGGAAGAACAGGGAGGGCTGGTAAAATGGGTTTAGCAACAGCCTTCTTCAATGACAATAATCTGTCAATGGCAAAGCCATTGGCTGATCTGATGCAAGAGGCAAATCAAGAAGTACCTGCCTGGCTCACGCGTTATGCATCTAGAGCTCACCATAGTGGTGGCAACAGAAATCGGCGTTCTGGGGGACCCCGTTTCGGTGGCCGTGATTATAGGAGGGACAGCCAACATAATAAAGGAGCTGACTACTATGGTGGAACAAGTGGATACGGTGTTCCTGCCACTTATGGTCCTCCAGGGGTTACCAGCGCTTGGGATTAG 1812 0.4713 MRTSWADSVDNSADGPPSANAVRPSRSAYVPPHLRNKPPSSEPPLTSHPSSLPASDRTNFVGSTAGYRGGSSFNKPDYGRQDYGSGGRIGGGWNNRGGGWDRGREREVNPFESDEATDHTLSEQENSGINFDAYDDIPVDTSGENVPPPVNTFAEIDLGEALDQNIKRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIINGILRMSHVQRPRVARTAFPLALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPIVQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPLQGMRQTMLFSATFPKEIQRLASDFLDNYVFLAVGRVGSSTDLIAQRVEYVLESDKRSHLMDLLHAQKENGIYGKQGLTLVFVETKKGADALEHWLCINGFPATSIHGDRSQQERELALRSFKSGNTPILVATDVAARGLDIPRVAHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNDNNLSMAKPLADLMQEANQEVPAWLTRYASRAHHSGGNRNRRSGGPRFGGRDYRRDSQHNKGADYYGGTSGYGVPATYGPPGVTSAWD 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02503 603 FunFam ATP-dependent RNA helicase RhlB 369 548 - -
Accr2g02503 603 MobiDBLite consensus disorder prediction 1 15 - -
Accr2g02503 603 CDD SF2_C_DEAD 378 514 - -
Accr2g02503 603 MobiDBLite consensus disorder prediction 560 576 - -
Accr2g02503 603 Gene3D - 369 549 IPR027417 -
Accr2g02503 603 Pfam Helicase conserved C-terminal domain 390 505 IPR001650 -
Accr2g02503 603 Gene3D - 107 368 IPR027417 -
Accr2g02503 603 SMART helicmild6 424 505 IPR001650 -
Accr2g02503 603 Pfam DEAD/DEAH box helicase 175 355 IPR011545 GO:0003676|GO:0005524
Accr2g02503 603 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 122 544 - -
Accr2g02503 603 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 231 522 IPR027417 -
Accr2g02503 603 CDD DEADc_DDX3_DDX4 152 372 IPR044763 GO:0003724|GO:0005524
Accr2g02503 603 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 182 366 IPR014001 -
Accr2g02503 603 MobiDBLite consensus disorder prediction 547 581 - -
Accr2g02503 603 MobiDBLite consensus disorder prediction 47 70 - -
Accr2g02503 603 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 151 179 IPR014014 GO:0003724
Accr2g02503 603 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 393 544 IPR001650 -
Accr2g02503 603 SMART ultradead3 170 381 IPR014001 -
Accr2g02503 603 FunFam Probable ATP-dependent RNA helicase DDX4 114 368 - -
Accr2g02503 603 MobiDBLite consensus disorder prediction 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02503 Accr-Chr2 60424222 60428748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02503 149 537 Eukaryotic Initiation Factors Gene Family AT3G19760 31.378 1.67e-59 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02503 K11594 - zju:107432305 914.835