Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02478 ATGGAGAAGACAAATTGGAGCGGGTTGGCAAGGACGAAATCGGAGCAGCTGGTGGAGGCACTGAGGTCGGGGCCGTCGAGCGAGTCGTCGATGAACGGGGTGATGGATAGTGGGGGAAGCGGAGGAACACTGTCGAGGAAGTCAAGTAGGAGGATGTCGCCGGGAGGGAAAAACAGCCACATAAGGAAGAGTAGGAGTGCGCAGATAAAGGTGGATTTGGATGAAGTGGGAAGCGGCGTCGCCCTCAGCCGAGCTTCCAGCGCCAGCTTGGGCCTCTCCTTCTCCTTCACCGGCTTCACTCTTACTCCTGATGAAATCACTGACTCTAATAAGCTCTTCAGGGACCAAGACATACGATTGCATATGTATATTGCAGCGGAGGATATTGAAGCTGGAACCTGCCACTTCAAGTTTCAAACGGAACCCACTCTGCCTATTTTTCTCAAGTTCAAGGATGTAAGCTACAAGGTGACGATCAAGGGCATGACAACAAGTGACGAGAAGGATATCTTAAATGGGATTACTGGTTCTGTGAATCCAGGTGAAGTCTTGGCACTGATGGGACCCTCTGGGAGTGGAAAGACTACCCTTTTGAATCTTCTAGGAGGCAGGTTGATTCAGACCACGGCTGGTGGTTCTATCACTTACAATGACGAGCCATACAGCAAATATCTCAAGAGCAAGATAGGATTTGTGACTCAAGATGATGTTCTGTTTCCTCACCTTACTGTGAAAGAAACACTTACTTACGCAGCCCGTCTACGTCTCCCGGATACATTCACAAAGGACCAGAAGGAAAAACGAGCCTTGGATGTCATCTATGAGCTTGGCTTAGAAAGGTGCAAAGACACTATGATCGGTGGCTCCTTTGTTCGCGGGGTATCTGGAGGGGAGAGGAAAAGAGTTTGCATTGGCAATGAGATTATAATCAATCCTTCGCTTCTCTTTCTGGATGAGCCAACTTCTGGTTTGGATTCTACAACAGCCTTGAAGATCGTTCAGATGCTACAGGACATAGCAGAGGCTGGTAAAACAGTAGTGACAACGATTCACCAACCATCAAGCAGACTGTTTCACAAATTTGATAAGCTGATCCTACTGGGAAAAGGCAGCTTGCTATACTTTGGCAAAGCATCTGAAGCAATACCTTATTTCCAATCTATAGGATGCTCCCCTCTTATTGCCATGAACCCAGCAGAGTTTTTGCTCGACCTCGCAAATGGAAACATAAGTGACGTTTCAGTACCATCTGAGTTAGAGGATAAAGTGCAGATAGGAAATGCAGAAGTTAAAACAAAGAATGGGAAACCATCACCAACAATGGTACAAGAGTATCTAGTAGAAGCATACGAGAGTCGAGTCTCTGAAACGGAGAAGAGGAAGCTAATGGTGCCCATCCCCCTTGACGAATCACTGAAGTCTAAGGTTTGTTCCCCTAAAAGACAGTGGGGTGCAAGTTGGTGTGAGCAGTATTCCATACTATTCTGCAGAGGAATAAAAGAACGGAGGCATGACTATTTCAGCTGGTTAAGAATCACCCAAGTTCTCTCTACTGCAGTCATCTTAGGATTACTTTGGTGGCAATCAGATGCTAACAATCCAAAAGGTCTTCAAGACCAGGCAGGGTTACTTTTCTTCATAGCGGTGTTCTGGGGATTCTTTCCGGTGTTCACAGCAATATTCACATTTCCTCAAGAGAGAGCAATGTTGGCAAAGGAGAGAGCAGTTGACATGTACAGACTAAGTGCATATTTTGTGGCCAGGACTACAAGTGATATTCCATTGGACTTGATACTACCAGTACTGTTCCTGCTGGTTGTTTATTTCATGGCCGGTCTGAGGCTAAGTGCCGACTCCTTTTTCTACAGCATTCTCATTGTCTTCCTCTGCATTGTGGCAGCTCAGGGACTTGGACTAGCTATTGGGGCCACATTAATGGACTTGAAGAAAGCAACAACTCTGGCTTCAGTGACTGTGATGGCCTTCATGCTGGCCGGAGGGTTTTTCGTTAAGGAAGTACCGAAATTCATATCGTGGATTCGGTACATTTCGTTTAACTACCACACATACAAACTTTTGTTGAAAGTGCAATATGGAGGCCTCTCGCGAGGCATAAATGGGATAAGAATTGACGATGGTTGGACAGAGGTTGGTGCTCTGATAGCAATGGTTTTTGGTTATCGTTTATTAGCCTACCTTTCGTTGCGGCGGATGAAGCTTCCATGCGGAGCTTAG 2235 0.4631 MEKTNWSGLARTKSEQLVEALRSGPSSESSMNGVMDSGGSGGTLSRKSSRRMSPGGKNSHIRKSRSAQIKVDLDEVGSGVALSRASSASLGLSFSFTGFTLTPDEITDSNKLFRDQDIRLHMYIAAEDIEAGTCHFKFQTEPTLPIFLKFKDVSYKVTIKGMTTSDEKDILNGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRLIQTTAGGSITYNDEPYSKYLKSKIGFVTQDDVLFPHLTVKETLTYAARLRLPDTFTKDQKEKRALDVIYELGLERCKDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALKIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAIPYFQSIGCSPLIAMNPAEFLLDLANGNISDVSVPSELEDKVQIGNAEVKTKNGKPSPTMVQEYLVEAYESRVSETEKRKLMVPIPLDESLKSKVCSPKRQWGASWCEQYSILFCRGIKERRHDYFSWLRITQVLSTAVILGLLWWQSDANNPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLAKERAVDMYRLSAYFVARTTSDIPLDLILPVLFLLVVYFMAGLRLSADSFFYSILIVFLCIVAAQGLGLAIGATLMDLKKATTLASVTVMAFMLAGGFFVKEVPKFISWIRYISFNYHTYKLLLKVQYGGLSRGINGIRIDDGWTEVGALIAMVFGYRLLAYLSLRRMKLPCGA 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02478 744 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 148 394 IPR003439 GO:0005524
Accr2g02478 744 ProSitePatterns ABC transporters family signature. 294 308 IPR017871 GO:0005524|GO:0016887
Accr2g02478 744 Pfam ABC transporter 171 322 IPR003439 GO:0005524
Accr2g02478 744 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 386 IPR027417 -
Accr2g02478 744 SMART AAA_5 180 371 IPR003593 GO:0016887
Accr2g02478 744 CDD ABCG_EPDR 145 376 - -
Accr2g02478 744 MobiDBLite consensus disorder prediction 1 65 - -
Accr2g02478 744 Gene3D - 147 387 IPR027417 -
Accr2g02478 744 Pfam ABC-2 type transporter 490 698 IPR013525 GO:0016020|GO:0140359
Accr2g02478 744 Pfam ABC-2 type transporter 351 452 IPR043926 GO:0140359
Accr2g02478 744 MobiDBLite consensus disorder prediction 19 62 - -
Accr2g02478 744 FunFam ABC transporter G family member 22 158 388 - -
Accr2g02478 744 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 100 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02478 Accr-Chr2 60212454 60218654 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02478 170 434 Calmodulin-binding Proteins AT2G36910 28.519 2.26e-16 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02478 K05681 - gmx:100798801 1142.49