Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02473 ATGGAAGTCAAGAACAAGGGAAATATGACATCAGTTGCAGCCTTTGTGGAAGGGGGCATTCAAGAAGCATGTGCTGACTCTTGCAGCATATGCCTTGAGGATTTTAGTGAAACCAATCCTTCAACGGTTACTTCTTGCAAGCATGATTTTCACCTGCAGTGCATTCTTGAATGGTGTCAGAGGAGCTCCCAGTGCCCTATGTGTTGGCAGTCTATTGGTTTCAAGGATTTAACCAGTCAAGAATTGTTTGAGGCTGTGGTTCATGAAAGGGATTTGAGAGCTACTTCCTCAAGAAATGCAACTATTTTCCAACATCTGGCTTTTGGTGATTTTGACCTGCAGCATTTATTATCAATGGGAGTAAGCGAAGCAGATATTGAAGAGAGGATAATTCAACATTTAGCTGCTGCCACAGTCATGGGAAGAGCCCACCATCTTGGTTGGAGAGAAGGAAATAGGACTAGGTCATATCCTCATGGTCGTCCTCCCTTCATAGTGTTCTCAACTCCTCCGCCTGGTGCTGTTTCAGCTGCTGGAGGGGGTACCGAACCAACCGCAATTCCTGTAGGAAATCCATCTAGCCCACTTAATTCTGAAGGAGATGAACCATCACAGCAGATCCCAAGCCTTCAAAGTTCTTTACCTTCTGGATCTACTGTCAGGGAGACAATTTGTGTTCTTTCTAATGATCGAAGCTCTACTGTCCAATCTGCACCACCTGACCAGGGCAGAGCAGGTCCATCAGAACTTAAGTCATTTTCCGAGTCTCTGCGATCCAGACTTGGTTCAGTGTCTATGAGATACAAAGAGAATATCTCAAAAGGCGCGAGGGGATGGAGGGAAAGGCTGTTCTCTCATGGTACTTCCATGTCTGATATTGGTTCAGAAGTTAGGAGAGAGTTTAATGCTGGAATTGCTAGTGTATCCCGATTGATGGAGCGCCTTGAAACAAGAGAAGATAACGATAGAGCAGGGGATAGTTCTTTGTCAAATCATTTGGCTGCAGAGACAAGCAACCTAAACAATGGTGAAGTTCGTGAGGTTAACACTCAGCATGAAAACACTCCAGCCGCTTGTTCTGCGGGCCCACGTTCAGACTGA 1101 0.455 MEVKNKGNMTSVAAFVEGGIQEACADSCSICLEDFSETNPSTVTSCKHDFHLQCILEWCQRSSQCPMCWQSIGFKDLTSQELFEAVVHERDLRATSSRNATIFQHLAFGDFDLQHLLSMGVSEADIEERIIQHLAAATVMGRAHHLGWREGNRTRSYPHGRPPFIVFSTPPPGAVSAAGGGTEPTAIPVGNPSSPLNSEGDEPSQQIPSLQSSLPSGSTVRETICVLSNDRSSTVQSAPPDQGRAGPSELKSFSESLRSRLGSVSMRYKENISKGARGWRERLFSHGTSMSDIGSEVRREFNAGIASVSRLMERLETREDNDRAGDSSLSNHLAAETSNLNNGEVREVNTQHENTPAACSAGPRSD 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02473 366 MobiDBLite consensus disorder prediction 230 251 - -
Accr2g02473 366 Pfam Ring finger domain 26 68 IPR001841 -
Accr2g02473 366 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 10 76 IPR013083 -
Accr2g02473 366 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 21 76 - -
Accr2g02473 366 MobiDBLite consensus disorder prediction 170 218 - -
Accr2g02473 366 SUPERFAMILY RING/U-box 21 75 - -
Accr2g02473 366 SMART ring_2 28 68 IPR001841 -
Accr2g02473 366 MobiDBLite consensus disorder prediction 317 366 - -
Accr2g02473 366 ProSiteProfiles Zinc finger RING-type profile. 28 68 IPR001841 -
Accr2g02473 366 MobiDBLite consensus disorder prediction 327 366 - -
Accr2g02473 366 MobiDBLite consensus disorder prediction 187 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02473 Accr-Chr2 60137764 60140041 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02473 2 76 C3H Transcription Factor Family AT5G38895 40.000 1.11e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02473 K19043 - qsa:O6P43_005750 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02473 2 60137764 60140041 Accr2g02473 2 60137764 60140041 ECH