Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02472 ATGGAGGTTCCGGACATGGAAGTCAAGAACAAGGGAAATATGACATCAGTTGCAGCCTTTGTGGAAGGGGGCATTCAAGAAGCATGTGCTGACTCTTGCAGCATATGCCTTGAGGATTTTAGTGAAACCAATCCTTCAACGGTTACTTCTTGCAAGCATGATTTTCACCTGCAGTGCATTCTTGAATGGTGTCAGAGGAGCTCCCAGTGCCCTATGTGTTGGCAGTCTATTGGTTTCAAGGATTTAACCAGTCAAGAATTGTTTGAGGCTGTGGTTCATGAAAGGGATTTGAGAGCTACTTCCTCAAGAAATGCAACTATTTTCCAACATCTGGCTTTTGGTGATTTTGACCTGCAGCATTTATTATCAATGGGAGTAAGCGAAGCAGATATTGAAGAGAGGATAATTCAACATTTAGCTGCTGCCACAGTCATGGGAAGAGCCCACCATCTTGGTTGGAGAGAAGGAAATAGGACTAGGTCATATCCTCATGGTCGTCCTCCCTTCATAGTGTTCTCAACTCCTCCGCCTGGTGCTGTTTCAGCTGCTGGAGGGGGTACCGAACCAACCGCAATTCCTGTAGGAAATCCATCTAGCCCACTTAATTCTGAAGGAGATGAACCATCACAGCAGATCCCAAGCCTTCAAAGTTCTTTACCTTCTGGATCTACTGTCAGGGAGACAATTTGTGTTCTTTCTAATGATCGAAGCTCTACTGTCCAATCTGCACCACCTGACCAGGGCAGAGCAGGTCCATCAGAACTTAAGTCATTTTCCGAGTCTCTGCGATCCAGACTTGGTTCAGTGTCTATGAGATACAAAGAGAATATCTCAAAAGGCGCGAGGGGATGGAGGGAAAGGCTGTTCTCTCATGGTACTTCCATGTCTGATATTGGTTCAGAAGTTAGGAGAGAGTTTAATGCTGGAATTGCTAGTGTATCCCGATTGATGGAGCGCCTTGAAACAAGAGAAGATAACGATAGAGCAGGGGATAGTTCTTTGTCAAATCATTTGGCTGCAGAGACAAGCAACCTAAACAATGGTGAAGTTCGTGAGGTTAACACTCAGCATGAAAACACTCCAGCCGCTTGTTCTGCGGGCCCACGTTCAGACTGA 1116 0.457 MEVPDMEVKNKGNMTSVAAFVEGGIQEACADSCSICLEDFSETNPSTVTSCKHDFHLQCILEWCQRSSQCPMCWQSIGFKDLTSQELFEAVVHERDLRATSSRNATIFQHLAFGDFDLQHLLSMGVSEADIEERIIQHLAAATVMGRAHHLGWREGNRTRSYPHGRPPFIVFSTPPPGAVSAAGGGTEPTAIPVGNPSSPLNSEGDEPSQQIPSLQSSLPSGSTVRETICVLSNDRSSTVQSAPPDQGRAGPSELKSFSESLRSRLGSVSMRYKENISKGARGWRERLFSHGTSMSDIGSEVRREFNAGIASVSRLMERLETREDNDRAGDSSLSNHLAAETSNLNNGEVREVNTQHENTPAACSAGPRSD 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02472 371 SMART ring_2 33 73 IPR001841 -
Accr2g02472 371 MobiDBLite consensus disorder prediction 322 371 - -
Accr2g02472 371 MobiDBLite consensus disorder prediction 235 257 - -
Accr2g02472 371 MobiDBLite consensus disorder prediction 332 371 - -
Accr2g02472 371 MobiDBLite consensus disorder prediction 192 223 - -
Accr2g02472 371 SUPERFAMILY RING/U-box 26 80 - -
Accr2g02472 371 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 13 81 IPR013083 -
Accr2g02472 371 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 26 81 - -
Accr2g02472 371 MobiDBLite consensus disorder prediction 175 223 - -
Accr2g02472 371 ProSiteProfiles Zinc finger RING-type profile. 33 73 IPR001841 -
Accr2g02472 371 Pfam Ring finger domain 31 73 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02472 Accr-Chr2 60137764 60140753 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02472 7 81 C3H Transcription Factor Family AT5G38895 40.000 1.26e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02472 K19043 - gmx:100803582 439.499