Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02460 ATGGCCATGCAAACTGTTTATTTTAAAGAAGCTGAAGGAACTACCCATAATTCCGCCGGCCATATGTCACCTGTAACTTCGGTTTCCTGGTGGAGCACGTTAGGGTCCCAAACAACTTTTGGCGACTCTTGTGGCCAAATGAAACCTTTTTCACTGGAGATTCCTAACTATGGAGACCAACTTTCTGCCAATAAGCAAGCAGGAAGAGGAGGTGAACAAGTGTTTGATAAAGGACACACCACTCAGTTCGCTATCTTTTCTGATGATTTTAAAATGTCAGGTGATCAGAAGTCTCAAACTGGCATATCACTTCAGTCATCAATTCCTGATCCTCACACTCGTCTTGAGCTGGGAATTAATCAGCCTGTGATGTGTGCAAAATATCCTTATATGGATCAATTTTATGGGCTCTTCTCAGCTTATGGACCTCAAATTCCGGGCCGTATGATGCTGCCACTTAACATGGCATCTGATAGTGGACCGATTTATGTTAACGCTAAGCAGTACCATGGAATCATCCGGCGTCGGCAGTCCCGTGCAAAGGCTGTGGTGGAGAATAAATTAATTGCACGTCGTAAGCCTTATATGCACGAATCACGCCATCTCCATGCAATGCGCCGCCCAAGAGGATGCGGTGGTCGGTTCCTGAACATGAAAAACTCGAAGAGTGGCGGCAACGCAAGAAGTGCAAGTGAAGGGAACAAAATTACTGGCGATGGTCAATTGCTGTCCACTGGTTCTCAAGGCTCTGAAGTGCTGCAGTCATCAAAGGATACAGGTGGCAGCAGTCCTCACATGTGTGGGTCAGAGGTAACTAGCATTTACACAAGGGGAGGTGTTGATCACGGCTTCCCATTCAACCATCTTGGACCAGCTGTTCATCACACTCTTGCAAGCATGATGGATGGTCACCACGGCGGCGGCGGCAGCATGGTTATGCCCACCGAATGGGTTGCAGCACCAGGAAAATGCTGCAGCCTTGAAGTTTGA 990 0.4758 MAMQTVYFKEAEGTTHNSAGHMSPVTSVSWWSTLGSQTTFGDSCGQMKPFSLEIPNYGDQLSANKQAGRGGEQVFDKGHTTQFAIFSDDFKMSGDQKSQTGISLQSSIPDPHTRLELGINQPVMCAKYPYMDQFYGLFSAYGPQIPGRMMLPLNMASDSGPIYVNAKQYHGIIRRRQSRAKAVVENKLIARRKPYMHESRHLHAMRRPRGCGGRFLNMKNSKSGGNARSASEGNKITGDGQLLSTGSQGSEVLQSSKDTGGSSPHMCGSEVTSIYTRGGVDHGFPFNHLGPAVHHTLASMMDGHHGGGGSMVMPTEWVAAPGKCCSLEV 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02460 329 Gene3D - 159 219 - -
Accr2g02460 329 ProSiteProfiles NF-YA/HAP2 family profile. 158 218 IPR001289 GO:0003700|GO:0006355
Accr2g02460 329 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 161 215 IPR001289 GO:0003700|GO:0006355
Accr2g02460 329 MobiDBLite consensus disorder prediction 220 266 - -
Accr2g02460 329 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 58 265 IPR001289 GO:0003700|GO:0006355
Accr2g02460 329 SMART cbf3 157 218 IPR001289 GO:0003700|GO:0006355
Accr2g02460 329 PRINTS CCAAT-binding transcription factor subunit B signature 161 183 IPR001289 GO:0003700|GO:0006355
Accr2g02460 329 PRINTS CCAAT-binding transcription factor subunit B signature 192 215 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02460 Accr-Chr2 60014967 60018537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02460 1 329 CCAAT-HAP2 Transcription Factor Family AT3G05690 37.960 1.21e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Accr2g02460 CBFB_NFYA 4.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02460 K08064 - gmx:100808195 410.223