Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02456 ATGAATGACTTGTTATCTGGCTCCTTCTCTCGCTTCCGGGGCGAGGAATCGTCGCTGGGCCATCACCAGCACCATGTCATCGAGATGGGTTCCATCGCGGCCTCCACCGGCGCCAGCAACCTCGACAAGTTCTTCGAGGACGTAGAATCTATAAAGGACGAGCTGAAAGAGCTCGAAAGACTGAACCAGAATCTGCAGAGCTCTAACGAGCAGAGCAAGATCCTTCACAATGCCAAGGCCGTCAAGGACCTTCGCTCTCGAATGGACGGCGACGTTGCTCTTGCTCTGAAGAAGGCCAAGCACATCAAGGTCAAATTGGAGGCATTGGAGCGATCGAACGCCGCCACCCTGAACCTTCCTGATTGCGGACCCGGTTCGTCATCGGACCGGACTCGGACATCCGTTGTGAGCGGTTTGAAAAAGAACCTGAAGGACTCCATGGACAGTTTCAATGAACTCAGGCAGCGGATCCTCGCCGAGTACCGGGAGACCGTGCAACGCAGATATTTCACCGTCACCGGTGAGAATCCCGACGAGAAGACCATCGACCTCCTGATTTCTACAGGTGAGAGTGAGACTTTCCTTCGTAAAGCCATCCAAGAACAAGGTAGAGGAAGAATACTGGACACCATCAATGAAATTCAAGAGAGGCACGATGCGGTGAAAGATTTGGAGAAGAATCTGCAGGAGTTGCATCAAGTGTTCCTGGATATTGCGGTGCTGGTACAATCCCAAGGCGAGCAATTGGATAATATTGAGAGCCACGTGGCGAGAGCGAACTCGTTTGTGAAGAGTGGGGCCCAGAAGCTACAGACAGCAAGGAAGCACCAGAAGAACACCAGGAAGTGGACCTGCTATGCCATTACGCTTCTGCTGGTGATCATCTTGATCGTGGTGCTCTTCACAGTGAGACCATGGCAAAATAATGGTGGTAGTTCGCCGTCGTCGTCACCACAAACACCTGCAGTTGCGCCGCCGCCGCCTCCTCCCCCTTCGGCTTAA 1002 0.5319 MNDLLSGSFSRFRGEESSLGHHQHHVIEMGSIAASTGASNLDKFFEDVESIKDELKELERLNQNLQSSNEQSKILHNAKAVKDLRSRMDGDVALALKKAKHIKVKLEALERSNAATLNLPDCGPGSSSDRTRTSVVSGLKKNLKDSMDSFNELRQRILAEYRETVQRRYFTVTGENPDEKTIDLLISTGESETFLRKAIQEQGRGRILDTINEIQERHDAVKDLEKNLQELHQVFLDIAVLVQSQGEQLDNIESHVARANSFVKSGAQKLQTARKHQKNTRKWTCYAITLLLVIILIVVLFTVRPWQNNGGSSPSSSPQTPAVAPPPPPPPSA 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02456 333 MobiDBLite consensus disorder prediction 319 333 - -
Accr2g02456 333 SUPERFAMILY t-snare proteins 40 266 IPR010989 GO:0016020|GO:0016192
Accr2g02456 333 Coils Coil 41 78 - -
Accr2g02456 333 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 211 273 IPR000727 -
Accr2g02456 333 Coils Coil 211 234 - -
Accr2g02456 333 CDD SNARE_syntaxin1-like 210 272 - -
Accr2g02456 333 FunFam Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 38 168 - -
Accr2g02456 333 Gene3D - 38 171 - -
Accr2g02456 333 FunFam Syntaxin 132 204 304 - -
Accr2g02456 333 ProSitePatterns Syntaxin / epimorphin family signature. 217 256 IPR006012 GO:0005484|GO:0006886|GO:0016020
Accr2g02456 333 PANTHER SYNTAXIN 58 298 IPR045242 -
Accr2g02456 333 MobiDBLite consensus disorder prediction 309 333 - -
Accr2g02456 333 SMART tSNARE_6 206 273 IPR000727 -
Accr2g02456 333 SMART SynN_4 36 162 IPR006011 GO:0016020
Accr2g02456 333 CDD SynN 41 198 IPR006011 GO:0016020
Accr2g02456 333 Gene3D - 208 304 - -
Accr2g02456 333 Pfam Syntaxin 43 246 IPR006011 GO:0016020
Accr2g02456 333 Pfam SNARE domain 247 299 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02456 Accr-Chr2 59983685 59985108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02456 29 330 SNARE and Associated Proteins AT3G11820 70.130 2.47e-149 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02456 K08486 - tcc:18598421 478.789