Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02447 ATGGCGACGTACTTCCATGGTAATTCAGAAATCCAAGGGCCCGACGGCCTCCAAACTCTTGTACTCATGAATCCAGGCTACATCCAGTACTCCGACACACCTCCTCCGCCGCAGCCATCACATCCTGGCAACCTCGTCTTCCTCAATTCCGCAAACAATTCGCTCCCTCCCCAAACCCTACAACACGCGCCGCCCTCTCACACCCAACAATTTGTCGGCATCCCTCTCCCCGCCGCCTCCTCCCACGAGGCCACGCACCAGTCCGTGCATCCCCATCACGATGTCTCTGCTTTGCATGGATTCTTGCCCCTCATGCAGTACAACCACTGGAACACAGTTCACTCCAACGCTGCGGCGGCGGCGAGTGATACCCCACGCTCTCAACAGGGTCTGTCCCTCAGTCTTTCCTCTCAGCAGGCAGGGATGGGCTCTTTCCGGGTCGACCGGGACGTACCATCACAGGGTCAGGCACCAGCCATGTCAGGGGATGATGTTCGCGCGTCAGGTGGGTCATCGTCTTCGGCCTCTGGAGTTACTAATGGCGTTTCAGGGATACAGAGCGTGCTTCTGGGCTCTAAGTACTTGAAGGCAGCCCAGGAACTTCTAGACGAGGTCGTCAACGTCAACGTTGGGATAACGAGCGAAATGGCCAAGAAAAGTAACAGCCAGACAAAGACGATTAAAGAGTCTCCCACGGCGGCAAGCGGAGATGGTTCCCCCGCCGGAGAAGGAACCGCCAAGCCTAGCTCTGAGCTCTCAACCGCGGAGAAACAAGATATTCAGATGAAGAAGGCAAAGTTAATCAGCATGCTTGAAGAGGTGGAGCAGAGGTACCGACAGTATCATCATCAGATGCAGATAGTGAGTTCTTCATTTGAACAAGCAGCAGGGATTGGGTCGGCGAGGACATATACAGCACTAGCACTACAAACGATCTCGAAGCAGTTTCGGTGTTTGAAAGATGCAATAATGGGCCAAATTCGAGCTTCCAACAAGAGCTTAGGAGAGGAAGATTGCCTCGGCACAAAAATGGAAGGTTCGAGGCTTAAATACGTGGACCATCATCTTCGCCAACAGCGAGCTCTCCAACAGTTAGGAATGATTCAGCACAATGCTTGGAGACCCCAGAGAGGATTGCCAGAAAGATCTGTCTCTGTTCTTCGCGCCTGGCTCTTCGAGCACTTCCTTCACCCTTACCCCAAGGACTCAGACAAACACATGCTTGCAAAACAAACAGGGCTCACCAGGAGCCAGGTCTCAAATTGGTTCATAAATGCGCGAGTACGATTGTGGAAGCCGATGGTGGAAGAAATGTACATGGAGGAGATGAAGGAGCAAGAACTGAACGGTGGGGAGGAGAAATCAAGCAAGAGCAGTGAAGATCCTGCCATGGCAGCCCCACAAGAGAGATCTCCTGCCTCTGCCGCCGAACCCAAAAGCTTGAATTTCAAACATGACGTTTCCACAAATCCCAACACTCCAACAGTTTCAGTATCTACGCCGTCAACATCACCGGTCGGAGGAAATGCCAGAAACTGCCCAGGGTTCAGCTTTATGGGGACTTCAGAGCTAGATGGGATCGCACAACCGAGTCCCAAGAGACCAAGAAACCATGAGATTCTGCAGTCCCAAATCAACGTTGTTGATGTGAAGCCTGAAGATGCAGGGAATGGTCAAATCTCCATGAAGTTTGGGGATGAGAGGCAGAGCAGAGACGGGTACTGTTTCATGGGAAATCAGACGAACTTCATTGGGGGATTTGGGCAATACCCAATTACAGAAATTGATAGGTTTGAGGCAGAACAATTCACACCAAGGTTCTCAGGTAATAATGGGGTTTCCCTCACTCTTGGTCTTCCTCACTGTGACTCATTATCAGCAGCAACACATCAAACATTTCTACCAAACCAGAGCATTCAACTTGGGAGAAGGATGGAGCTAGGTGAACCAAACGAGTTTGGTGGCATAAACTCTTCGACTGCTCTCTCTTCAGCAGCATTTGAGAATATGAATATGCAGAACCCAAAGAAGTTTGCTGCACGATTGTTGCCAGACTTTGTGGCTTGA 2067 0.5109 MATYFHGNSEIQGPDGLQTLVLMNPGYIQYSDTPPPPQPSHPGNLVFLNSANNSLPPQTLQHAPPSHTQQFVGIPLPAASSHEATHQSVHPHHDVSALHGFLPLMQYNHWNTVHSNAAAAASDTPRSQQGLSLSLSSQQAGMGSFRVDRDVPSQGQAPAMSGDDVRASGGSSSSASGVTNGVSGIQSVLLGSKYLKAAQELLDEVVNVNVGITSEMAKKSNSQTKTIKESPTAASGDGSPAGEGTAKPSSELSTAEKQDIQMKKAKLISMLEEVEQRYRQYHHQMQIVSSSFEQAAGIGSARTYTALALQTISKQFRCLKDAIMGQIRASNKSLGEEDCLGTKMEGSRLKYVDHHLRQQRALQQLGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEMKEQELNGGEEKSSKSSEDPAMAAPQERSPASAAEPKSLNFKHDVSTNPNTPTVSVSTPSTSPVGGNARNCPGFSFMGTSELDGIAQPSPKRPRNHEILQSQINVVDVKPEDAGNGQISMKFGDERQSRDGYCFMGNQTNFIGGFGQYPITEIDRFEAEQFTPRFSGNNGVSLTLGLPHCDSLSAATHQTFLPNQSIQLGRRMELGEPNEFGGINSSTALSSAAFENMNMQNPKKFAARLLPDFVA 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02447 688 ProSiteProfiles 'Homeobox' domain profile. 370 433 IPR001356 GO:0003677
Accr2g02447 688 MobiDBLite consensus disorder prediction 119 178 - -
Accr2g02447 688 Coils Coil 257 284 - -
Accr2g02447 688 MobiDBLite consensus disorder prediction 43 68 - -
Accr2g02447 688 SUPERFAMILY Homeodomain-like 374 440 IPR009057 -
Accr2g02447 688 Gene3D - 376 454 - -
Accr2g02447 688 MobiDBLite consensus disorder prediction 119 143 - -
Accr2g02447 688 Pfam Associated with HOX 188 324 IPR006563 -
Accr2g02447 688 CDD homeodomain 373 433 IPR001356 GO:0003677
Accr2g02447 688 MobiDBLite consensus disorder prediction 218 233 - -
Accr2g02447 688 FunFam BEL1-like homeodomain protein 9 376 438 - -
Accr2g02447 688 SMART prehox3 183 325 IPR006563 -
Accr2g02447 688 SMART HOX_1 373 437 IPR001356 GO:0003677
Accr2g02447 688 Pfam Homeobox KN domain 390 429 IPR008422 GO:0003677|GO:0006355
Accr2g02447 688 MobiDBLite consensus disorder prediction 444 508 - -
Accr2g02447 688 MobiDBLite consensus disorder prediction 30 72 - -
Accr2g02447 688 MobiDBLite consensus disorder prediction 483 508 - -
Accr2g02447 688 MobiDBLite consensus disorder prediction 444 459 - -
Accr2g02447 688 MobiDBLite consensus disorder prediction 218 258 - -
Accr2g02447 688 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 95 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02447 Accr-Chr2 59890248 59892599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02447 1 688 Homeobox Transcription Factor Family AT2G35940 49.407 1.15e-180 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Accr2g02447 POX 1.5e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02447 - - qsa:O6P43_006028 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02447 2 59890248 59892599 Accr5g02092 5 47231223 47233740 CCT
Accr2g02447 2 59890248 59892599 Accr2g02447 2 59890248 59892599 ECH