Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr2g02443 | ATGAACCGCGCAGCTCCCACCATGGTCGGGCATCTCCTGAAGCTTGTTTCAGCACTCATTCTCTCGCTTGCTGTTGGGGGTTTTAGTGCCACTGATCCGAATGACGTTAAGATTCTCAACCAATTCAGGAAAGGTTTGGACAACCCAGAGCTTCTGCCGTGGCCTGAAGATGGTGGAGACCCATGTGGGAGCCCTACTTGGAAGTACATCTTCTGCAAGGGAAATAGAATTTCCCAGATTCAGGCTAAGAACTTGAACTTGAGTGGTCCTCTGCCTCAGAATTTCAACGAGCTCTCCATGCTTGAAAATATTGGCCTTCAGAACAACAAACTCAACGGGTCATTACCGTCTTTCCGTGGGTTATCCAATTTGAGATATGCATACTTGGACTACAATGACTTCGATTCCATCCCTGCTGATTTCTTTGACGGGCTAGCGAGCCTGGAAGCCCTGGCATTGGATTATAATAATTTTAATGCCAGTACTGGGTGGCAATTTCCCCCTCCTTTGCAAGGTTCACCACAATTAACCAATCTTTCCTGTATGAGCTGCAACTTAGCCGGTCCATTGCCGAGTTTTCTGGGGAATTTGTCTTCTCTGTCTGTCCTGAAGCTTTCAAACAACAATTTAACTGGTGAAATTCCGGCAACTTTAAGTGGTTCGATTTTGCAGGTTCTGTGGTTGAACGATCAACAGAACGGTGGCATCACTGGTTCTATTGATGTGGTGGCAACCATGACTTCGCTTACGAGTCTGTGGCTTCATGGAAATCACTTCACGGGGACGATTCCTAAGAACATTGGGGATTTGACTTCTCTCAAGGATTTCAATCTCAATTCTAACCAGCTCGTTGGCCAAATCCCAGATGCTTTGAGTAAAATCAAACTCGACAATCTTGATTTGAACAACAACCACCTAATGGGACCGATCCCAACTTTCGCAGCAGGCAAAGTTTCATTCGATAATAATTATTTTTGTCAACCCAAACCTGGGGCTCTTTGTGCCTTTGAAGTCATGGCACTTCTCGATTTTTTGGATGGGTTGAATTATCCTTTAAATCTAGTTGAATCCTGGTTTGGTAATGACCCATGTAATGGTCCATGGCTGGGACTAAAATGCGATGCTTCTGGAAAGGTGTCAATGATTAATCTGCCCAAATTTAAACTCAATGGCACTCTGAGCCCCTCAGTTGCAAACTTAGGTTCTCTTGTTGAGATCAGACTGGAGGGCAACAATCTGAGTGGTCAAATACCTAGTAATTGGACTAGTTTGAGTTCTCTGACAATGTTGGATCTCAGTGATAATAACATTTCCCCTCCACTGCCTCATTTTAGCAGCAAGTTGAAACTTGTCGATGCTGGGAACTCTTTATTGAATGGGAACCCAGAGGCCCCTTCATCTGGGAACAGCTCATCTTCTGGGAATTCTAGTCCTTCAAGTAATACTCCATCCCCATCTACACGCACAAATCCCAGTCCCAACACTACTGCTAGATCACAAAATTCCAGCAGGAAAATTTTGGTTGCAATTGTAGCCCCTGTTGCTGGTGTTGCGGCAGCAGCTTTTCTGCTCATTCCCCTGATATATTGTTACAAGAGGAGAAAAGATAGCTCACTGGCTCCAAGTTCACTAGTAATCCACCCTAGAGATCCATCTGATTCAGAGCGTACGGTGAAGATTGCTGTGGCTAACAATACGTATGGAAGCATGTCCACATTAACTGGGAGTGGATCACAAAGTAGAAACAGCAGTGGAACTGGGGAGTCTCATGTCATTGAAGCTGGAAATCTTGTGATATCAGTTCAAGTTCTTCGAAATGTGACTAAGAACTTTGCCCCAGAGAATGAGCTTGGTCGTGGTGGATTTGGTGTCGTATATAAGGGAGAATTGGATGATGGGACTAAAATAGCAGTGAAAAGAATGGAAGCTGGTATAATCAGTAACAAGGCGTTGGATGAATTTCAGTCTGAAATTGCTGTTCTATCAAAAGTTAGACACCGTCATCTAGTGTCTCTGCTGGGTTACTCTGTTGAAGGTAATGAAAGAATTCTAGTTTATGAGTATATGTCACAAGGGGCTCTCAGCAAACATCTTTTTCACTGGAAGAGCCTTAAGTTGGAGCCACTTTCTTGGAAAAGGAGGCTCAATATTGTATTGGATGTTGCTAGAGGAATGGAGTATCTCCATAGTCTGGCTCATCAGAGCTTCATTCACAGGGATCTTAAGCCCTCCAATATTTTGCTTGGGGATGATTTTAGAGCCAAAGTCTCTGACTTTGGATTGGTTAAACTTGCTCCAGATGGTGAAAAATCTGTAGTAACTCAGCTTGCTGGGACCTTTGGCTACTTAGCCCCAGAATATGCAGTGACGGGAAAAATCACAACCAAAGCAGATGTCTTTAGTTTTGGAGTTGTGCTAATGGAGTTGTTGACTGGGTTGATGGCACTTGATGAGGATAGACCTGAGGAAAGCCAATACTTGCCCGCATGGTTCTGGCATATAAAATCTGATAAGGAGAAACTTATGGCTGCTATTGATCCATCCCTTGACAAAAAAGAAGAAACTTTTGAGAGTATCACTGTCATTGCGGAGCTAGCTGGTCACTGCACTGCAAGAGAACCAAGCCAGCGACCAGATATGGGCCATGCTGTGAATGTTCTGGCTCCACTCGTTGAAAAATGGAAACCTCTTGATGATGACACTGAGGAGTATTCTGGAATTGATTATAGCCTTCCCCTTAATCAGATGGTGAAAGGTTGGCAAGAGGCAGAAGGAAAGGACTTGAGTTACATGGACCTGGAAGACAGCAAGGGTAGTATCCCCGTAAGGCCTACTGGATTTGCAGATTCTTTTACATCTGCTGACGGCCGCTAA | 2874 | 0.4426 | MNRAAPTMVGHLLKLVSALILSLAVGGFSATDPNDVKILNQFRKGLDNPELLPWPEDGGDPCGSPTWKYIFCKGNRISQIQAKNLNLSGPLPQNFNELSMLENIGLQNNKLNGSLPSFRGLSNLRYAYLDYNDFDSIPADFFDGLASLEALALDYNNFNASTGWQFPPPLQGSPQLTNLSCMSCNLAGPLPSFLGNLSSLSVLKLSNNNLTGEIPATLSGSILQVLWLNDQQNGGITGSIDVVATMTSLTSLWLHGNHFTGTIPKNIGDLTSLKDFNLNSNQLVGQIPDALSKIKLDNLDLNNNHLMGPIPTFAAGKVSFDNNYFCQPKPGALCAFEVMALLDFLDGLNYPLNLVESWFGNDPCNGPWLGLKCDASGKVSMINLPKFKLNGTLSPSVANLGSLVEIRLEGNNLSGQIPSNWTSLSSLTMLDLSDNNISPPLPHFSSKLKLVDAGNSLLNGNPEAPSSGNSSSSGNSSPSSNTPSPSTRTNPSPNTTARSQNSSRKILVAIVAPVAGVAAAAFLLIPLIYCYKRRKDSSLAPSSLVIHPRDPSDSERTVKIAVANNTYGSMSTLTGSGSQSRNSSGTGESHVIEAGNLVISVQVLRNVTKNFAPENELGRGGFGVVYKGELDDGTKIAVKRMEAGIISNKALDEFQSEIAVLSKVRHRHLVSLLGYSVEGNERILVYEYMSQGALSKHLFHWKSLKLEPLSWKRRLNIVLDVARGMEYLHSLAHQSFIHRDLKPSNILLGDDFRAKVSDFGLVKLAPDGEKSVVTQLAGTFGYLAPEYAVTGKITTKADVFSFGVVLMELLTGLMALDEDRPEESQYLPAWFWHIKSDKEKLMAAIDPSLDKKEETFESITVIAELAGHCTAREPSQRPDMGHAVNVLAPLVEKWKPLDDDTEEYSGIDYSLPLNQMVKGWQEAEGKDLSYMDLEDSKGSIPVRPTGFADSFTSADGR | 957 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr2g02443 | 957 | Pfam | Protein tyrosine and serine/threonine kinase | 614 | 885 | IPR001245 | GO:0004672|GO:0006468 | |
Accr2g02443 | 957 | Gene3D | Ribonuclease Inhibitor | 336 | 461 | IPR032675 | - | |
Accr2g02443 | 957 | Pfam | Leucine rich repeat | 101 | 158 | IPR001611 | GO:0005515 | |
Accr2g02443 | 957 | CDD | STKc_IRAK | 617 | 890 | - | - | |
Accr2g02443 | 957 | ProSitePatterns | Protein kinases ATP-binding region signature. | 617 | 639 | IPR017441 | GO:0005524 | |
Accr2g02443 | 957 | Gene3D | Ribonuclease Inhibitor | 32 | 331 | IPR032675 | - | |
Accr2g02443 | 957 | ProSiteProfiles | Protein kinase domain profile. | 611 | 891 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Accr2g02443 | 957 | MobiDBLite | consensus disorder prediction | 459 | 501 | - | - | |
Accr2g02443 | 957 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 736 | 748 | IPR008271 | GO:0004672|GO:0006468 | |
Accr2g02443 | 957 | Pfam | Leucine rich repeat N-terminal domain | 338 | 374 | IPR013210 | - | |
Accr2g02443 | 957 | Pfam | Leucine rich repeat N-terminal domain | 33 | 72 | IPR013210 | - | |
Accr2g02443 | 957 | SMART | LRR_typ_2 | 424 | 448 | IPR003591 | - | |
Accr2g02443 | 957 | SMART | LRR_typ_2 | 121 | 144 | IPR003591 | - | |
Accr2g02443 | 957 | SMART | LRR_typ_2 | 145 | 168 | IPR003591 | - | |
Accr2g02443 | 957 | SMART | LRR_typ_2 | 246 | 270 | IPR003591 | - | |
Accr2g02443 | 957 | SMART | LRR_typ_2 | 197 | 221 | IPR003591 | - | |
Accr2g02443 | 957 | SMART | LRR_typ_2 | 400 | 423 | IPR003591 | - | |
Accr2g02443 | 957 | MobiDBLite | consensus disorder prediction | 455 | 501 | - | - | |
Accr2g02443 | 957 | FunFam | receptor protein kinase TMK1 | 689 | 906 | - | - | |
Accr2g02443 | 957 | FunFam | Receptor-like kinase TMK4 | 33 | 331 | - | - | |
Accr2g02443 | 957 | Gene3D | Phosphorylase Kinase; domain 1 | 572 | 688 | - | - | |
Accr2g02443 | 957 | SMART | serkin_6 | 611 | 891 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Accr2g02443 | 957 | FunFam | Leucine-rich repeat receptor-like kinase | 336 | 461 | - | - | |
Accr2g02443 | 957 | FunFam | receptor protein kinase TMK1 | 573 | 688 | - | - | |
Accr2g02443 | 957 | SUPERFAMILY | Protein kinase-like (PK-like) | 586 | 887 | IPR011009 | - | |
Accr2g02443 | 957 | Gene3D | Transferase(Phosphotransferase) domain 1 | 689 | 907 | - | - | |
Accr2g02443 | 957 | SUPERFAMILY | L domain-like | 66 | 449 | - | - | |
Accr2g02443 | 957 | PANTHER | OSJNBA0070M12.3 PROTEIN | 18 | 957 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr2g02443 | Accr-Chr2 | 59813381 | 59816752 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr2g02443 | 82 | 892 | Receptor kinase-like Gene Family | AT5G07280 | 32.986 | 1.25e-86 | 300 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-IX | Accr2g02443 | PK_Tyr_Ser-Thr | 1.6e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr2g02443 | K00924 | - | qsa:O6P43_009671 | 1407.12 |