Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02423 ATGGGGCGCGTCCGAACCAAAACCGTGAAGAAGTCTTCTCGCCAAGTGATAGAGAAGTATTACTCTCGAATGACCTTGGATTTTCACACAAACAAGAAAATCCTGGAGGAGGTAGCTCTCATTCCCTCCAAGAGGCTCCGCAATAAGATTGCCGGATTCTCCACCCACCTGATGAAGAGGATTCAGAAGGGTCCCGTTCGGGGCATTTCCCTCAAGCTTCAAGAGGAGGAGCGTGAGCGCAGAATGGATTTCGTGCCCGATGTTTCTGCAATTAAGACGGATCAGATTGAGGTCGATAAGGAGACTCTTGATATGCTCAACGCTCTTGGCATGAACGAGATTCCAGGGATTGTCCAAGTTGATCCCGTTCCCGTTCAACAATCCTTTGGATTTGGCCGCGGTGGTTTTGGTGGAGCCGGCAGGAGGTTCTAA 432 0.5023 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVALIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDKETLDMLNALGMNEIPGIVQVDPVPVQQSFGFGRGGFGGAGRRF 143
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02423 143 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Accr2g02423 143 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Accr2g02423 143 PANTHER 40S RIBOSOMAL PROTEIN S17 1 127 IPR001210 GO:0003735|GO:0005840|GO:0006412
Accr2g02423 143 Pfam Ribosomal S17 1 120 IPR001210 GO:0003735|GO:0005840|GO:0006412
Accr2g02423 143 FunFam 40S ribosomal protein S17 1 62 - -
Accr2g02423 143 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Accr2g02423 143 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Accr2g02423 Accr-Chr2 59598253 59598684 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02423 1 143 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 80.556 6.33e-78 225
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02423 K02962 - gmx:100527036 235.343