Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr2g02423 | ATGGGGCGCGTCCGAACCAAAACCGTGAAGAAGTCTTCTCGCCAAGTGATAGAGAAGTATTACTCTCGAATGACCTTGGATTTTCACACAAACAAGAAAATCCTGGAGGAGGTAGCTCTCATTCCCTCCAAGAGGCTCCGCAATAAGATTGCCGGATTCTCCACCCACCTGATGAAGAGGATTCAGAAGGGTCCCGTTCGGGGCATTTCCCTCAAGCTTCAAGAGGAGGAGCGTGAGCGCAGAATGGATTTCGTGCCCGATGTTTCTGCAATTAAGACGGATCAGATTGAGGTCGATAAGGAGACTCTTGATATGCTCAACGCTCTTGGCATGAACGAGATTCCAGGGATTGTCCAAGTTGATCCCGTTCCCGTTCAACAATCCTTTGGATTTGGCCGCGGTGGTTTTGGTGGAGCCGGCAGGAGGTTCTAA | 432 | 0.5023 | MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVALIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDKETLDMLNALGMNEIPGIVQVDPVPVQQSFGFGRGGFGGAGRRF | 143 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr2g02423 | 143 | SUPERFAMILY | Rps17e-like | 1 | 62 | IPR036401 | GO:0003735|GO:0005840|GO:0006412 | |
Accr2g02423 | 143 | Hamap | 30S ribosomal protein S17e [rps17e]. | 1 | 63 | IPR001210 | GO:0003735|GO:0005840|GO:0006412 | |
Accr2g02423 | 143 | PANTHER | 40S RIBOSOMAL PROTEIN S17 | 1 | 127 | IPR001210 | GO:0003735|GO:0005840|GO:0006412 | |
Accr2g02423 | 143 | Pfam | Ribosomal S17 | 1 | 120 | IPR001210 | GO:0003735|GO:0005840|GO:0006412 | |
Accr2g02423 | 143 | FunFam | 40S ribosomal protein S17 | 1 | 62 | - | - | |
Accr2g02423 | 143 | Gene3D | - | 1 | 62 | IPR036401 | GO:0003735|GO:0005840|GO:0006412 | |
Accr2g02423 | 143 | ProSitePatterns | Ribosomal protein S17e signature. | 41 | 56 | IPR018273 | GO:0003735|GO:0005840|GO:0006412 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr2g02423 | Accr-Chr2 | 59598253 | 59598684 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr2g02423 | 1 | 143 | Cytoplasmic Ribosomal Protein Gene Family | AT5G04800 | 80.556 | 6.33e-78 | 225 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr2g02423 | K02962 | - | gmx:100527036 | 235.343 |