Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr2g02416 | ATGGCAGCGATCACAAGATTCATTGGCACCCGTTCTGCTTTGCCTCACTTCTCACTTGTTTCCCCTGCTCTCAGTAGAGGAATTGCCTACAAACTCTTCGTTGGAGGATTGTCATTTCACACAACGGAGAAAGGATTGTCAGAAGCATTTTCTGATCACGGTCAAGTTGTTGAAGCAAAAATTGTGATGGACAAGGTATCAGATAGATCAAAGGGGTTTGGGTTTGTCACCTTTGCCTCAGAGGATGAGGCTGAGAATGCCATAACAGGGATGAATGGGAAGGCACTAAACGGTCGTGTTATCTTTGTGGATTATGCAAAACCCAAATCTAATATCCGTGATGGAATGCCAATTGCTAGAGGACCTCCTGAACCAACAGCAGACTGTTAA | 390 | 0.4462 | MAAITRFIGTRSALPHFSLVSPALSRGIAYKLFVGGLSFHTTEKGLSEAFSDHGQVVEAKIVMDKVSDRSKGFGFVTFASEDEAENAITGMNGKALNGRVIFVDYAKPKSNIRDGMPIARGPPEPTADC | 129 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr2g02416 | 129 | Gene3D | - | 21 | 114 | IPR012677 | - | |
Accr2g02416 | 129 | PANTHER | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED | 27 | 113 | - | - | |
Accr2g02416 | 129 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 30 | 108 | IPR000504 | GO:0003723 | |
Accr2g02416 | 129 | SMART | rrm1_1 | 31 | 104 | IPR000504 | GO:0003723 | |
Accr2g02416 | 129 | SUPERFAMILY | RNA-binding domain, RBD | 30 | 121 | IPR035979 | GO:0003676 | |
Accr2g02416 | 129 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 32 | 101 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr2g02416 | Accr-Chr2 | 59482240 | 59483986 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr2g02416 | 32 | 113 | Eukaryotic Initiation Factors Gene Family | AT2G23350 | 35.366 | 3.10e-09 | 52.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr2g02416 | - | - | pcin:129307886 | 205.297 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Accr2g02416 | 2 | 59482240 | 59483986 | Accr2g02416 | 2 | 59482240 | 59483986 | ECH |