Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02416 ATGGCAGCGATCACAAGATTCATTGGCACCCGTTCTGCTTTGCCTCACTTCTCACTTGTTTCCCCTGCTCTCAGTAGAGGAATTGCCTACAAACTCTTCGTTGGAGGATTGTCATTTCACACAACGGAGAAAGGATTGTCAGAAGCATTTTCTGATCACGGTCAAGTTGTTGAAGCAAAAATTGTGATGGACAAGGTATCAGATAGATCAAAGGGGTTTGGGTTTGTCACCTTTGCCTCAGAGGATGAGGCTGAGAATGCCATAACAGGGATGAATGGGAAGGCACTAAACGGTCGTGTTATCTTTGTGGATTATGCAAAACCCAAATCTAATATCCGTGATGGAATGCCAATTGCTAGAGGACCTCCTGAACCAACAGCAGACTGTTAA 390 0.4462 MAAITRFIGTRSALPHFSLVSPALSRGIAYKLFVGGLSFHTTEKGLSEAFSDHGQVVEAKIVMDKVSDRSKGFGFVTFASEDEAENAITGMNGKALNGRVIFVDYAKPKSNIRDGMPIARGPPEPTADC 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02416 129 Gene3D - 21 114 IPR012677 -
Accr2g02416 129 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 27 113 - -
Accr2g02416 129 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 30 108 IPR000504 GO:0003723
Accr2g02416 129 SMART rrm1_1 31 104 IPR000504 GO:0003723
Accr2g02416 129 SUPERFAMILY RNA-binding domain, RBD 30 121 IPR035979 GO:0003676
Accr2g02416 129 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 32 101 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02416 Accr-Chr2 59482240 59483986 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02416 32 113 Eukaryotic Initiation Factors Gene Family AT2G23350 35.366 3.10e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02416 - - pcin:129307886 205.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02416 2 59482240 59483986 Accr2g02416 2 59482240 59483986 ECH