Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02406 ATGGAGAATATGGCACCAGGATATCGGTTCTACCCAACTGAAGAGGAACTCATTTCCTTCTATTTGAAGAGAAAGCTTGAGGGAGATCAGAGTGAGGACGTCAACCGGGTTATACCTGAGCTTGATATTTATGAATACAATCCATGGGATCTCCCACAGGTGTCGGGAGAGGCGAGCCTGAGAGACACGGAGCAGTGGTTCTTTTTCATTCCGAGGCAAGAAAGCGAAGCTCGCGGAGGAAGACCAAGACGACTCACAACAACCGGCTACTGGAAGGCCACCGGATCTCCTAACCACGTTTATTCCTCTGAAAATCGCATCATCGGCATGAAAAGAACCATGGTTTTCTACAACGGAAGAGCCCCCAACGGCCGTAAAACCGATTGGAAGATGAACGAGTACAAGGCCATCGTCAGCGCCGAACCATCCTCCACTCTCCCACCCGATCCCCGGATAAGGGTGGAATACAGTGTATGCAGGGTGTACAAGAAATCAAAGTGCCTGAGAGCGTTTGATAGGAGGCCACCTCCAAGGAAGGAGATAATAATGGATGTATCTGGGGGTTCAGCCTCAACGTCTCAGCAGCAACAACAAGTGCAAAACCCAGATGCATCGGGATCATCGTCAATGGGAGCGATAGGTGGTATAGCAAGCTCTCCTGATGAGAGTTCATCGCTATCAGGTGGAGACCATCATGGTGGTGGTGGGCAGGCTTCACAGAGTGGGGAAGCGGAGGGTCAAATGGAGTTGGACGATGAGCCCTTGTTGGATTGGGAGCAAGTTGACTGGTTTCTTGCCAAGCATGACTCAACCGTGTGA 819 0.5079 MENMAPGYRFYPTEEELISFYLKRKLEGDQSEDVNRVIPELDIYEYNPWDLPQVSGEASLRDTEQWFFFIPRQESEARGGRPRRLTTTGYWKATGSPNHVYSSENRIIGMKRTMVFYNGRAPNGRKTDWKMNEYKAIVSAEPSSTLPPDPRIRVEYSVCRVYKKSKCLRAFDRRPPPRKEIIMDVSGGSASTSQQQQQVQNPDASGSSSMGAIGGIASSPDESSSLSGGDHHGGGGQASQSGEAEGQMELDDEPLLDWEQVDWFLAKHDSTV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02406 272 Gene3D NAC domain 13 168 IPR036093 GO:0003677|GO:0006355
Accr2g02406 272 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 218 - -
Accr2g02406 272 SUPERFAMILY NAC domain 3 164 IPR036093 GO:0003677|GO:0006355
Accr2g02406 272 ProSiteProfiles NAC domain profile. 4 164 IPR003441 GO:0003677|GO:0006355
Accr2g02406 272 MobiDBLite consensus disorder prediction 186 226 - -
Accr2g02406 272 Pfam No apical meristem (NAM) protein 6 135 IPR003441 GO:0003677|GO:0006355
Accr2g02406 272 MobiDBLite consensus disorder prediction 173 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02406 Accr-Chr2 59385501 59388069 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02406 7 263 NAC Transcription Factor Family AT5G22380 45.525 6.86e-73 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr2g02406 NAM 6.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02406 - - gmx:100777948 304.679