Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02349 ATGAAGGTGATCGCTGCGTATTTGCTCGCCGTTTTGGGTGGCAACACTAGCCCTTCCGCCGATGATATCAAACATATCCTTGGATCTGTTGGAGCAGAAGCGGATGATGATAGAATTGAACTTCTTTTGTCTGAATTGAAGGGCAGAGATATAACGGAGGTTATTGCCAGTGGTAGGGAAAAGTTGGCCTCAGTGCCCTCTGGCGGTGGGGCTGCAGTTGCGGTGGCTGCTGCACCTGGAGCTGGTGGTGCCACCGCGGCTCCAGCTGCGGGTGAGTCAAAGAAAGAGGAAAAGGTGGAGGAGAAAGAGGAATCTGATGACGATATGGGCTTCAGCCTCTTCGATTAA 348 0.5201 MKVIAAYLLAVLGGNTSPSADDIKHILGSVGAEADDDRIELLLSELKGRDITEVIASGREKLASVPSGGGAAVAVAAAPGAGGATAAPAAGESKKEEKVEEKEESDDDMGFSLFD 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02349 115 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
Accr2g02349 115 FunFam 60S acidic ribosomal protein P2 1 59 - -
Accr2g02349 115 Gene3D - 1 59 IPR038716 -
Accr2g02349 115 MobiDBLite consensus disorder prediction 82 115 - -
Accr2g02349 115 Pfam 60s Acidic ribosomal protein 17 114 - -
Accr2g02349 115 Hamap 50S ribosomal protein L12 [rpl12]. 2 115 IPR027534 GO:0003735|GO:0005840|GO:0006414
Accr2g02349 115 CDD Ribosomal_P2 1 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02349 Accr-Chr2 58800647 58801780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02349 1 115 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 65.217 1.20e-33 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02349 K02943 - dct:110094208 140.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02349 2 58800647 58801780 Accr2g02349 2 58800647 58801780 ECH