Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02344 ATGGAATTCCATCTCAAGCAATGGAAAAACCACCATGACTCTGAATCTGAAGACCAACATTTTGCAAAGATGCCCAGGCTCATGCTTGAATCCCATCTTCATTCATCATCCCCCTCTTCCCCGGCTCTCCCTCTCTTTTTACCTGAACTCAACTCCAAAGTCAGCTCCCTCTCCTCCCTTTCTGATTCCTCTATATCACCCGCGCCCAGATTTCCAAGAATGGGAAGTTACTTCAGTTTGGCTCAGTGGCAGGAGCTGGAGTTGCAGGCACTGATATTCAGGTACATGTTGGCGGGTGCTGCTGTTCCTCCTGATCTTCTTCTGCCAATTAAGAAGAGCCTTCTTCATTCTGCTTCTTATTTCCTCCATTACCAGCCTTCTATGTTGCAAACGGGATACTGGAGCGGAGCTCCCATGGATCCGGAGCCCGGCCGCTGCCGGAGGACGGACGGCAAGAAATGGCGGTGCTCTAGAGACGTGGTGGCCGGTCAGAAGTACTGTGAGCGCCACGTGCATCGTGGTCGAAACCGTTCAAGAAAGCCTGTGGAAGTACCCACGCCAGCCACCGCAGTAGGCGTTGGCTCTGCCACCGCCGGCACCGGCGTCGGGTGTCCCTCTGCTACAACAGCCTCTGTATCTGCCTTGCACATGACTCCAACTGCGTTGAGATCCCCTTTCGATCTACCTCAGCTGAATCGATGTTCATCTGGGATCATTAAGAATGAAAAAGAGAGCGTGTTCGAAAATCAAAGTCGAGATAATGTGGACGGTGAAGGGAGATCAGATGGGCATATTCTGCGACATTTTTTCGATGACTGGCCACGATCACTTCAGGAACCTGACAATGCCGAAAGTAAGGCCGGCTCCATCAGCTCAGCCACATGCCTCTCTATTTCAATGCCCGGAAAGGCTTCTTCGTCGGACGTGTCACTGAAATTGTCCACTGGCGACGATGCAGAGGATCGATGTCCTAGAAGTGGGAATGTAGGCCCACAGAATTTGCAGTTGAATTGGGCAGGAGGATGGGCTTCTTCGGCTAATCATGTGGCCTCAATGGGAGGACCACTCGCAGAGGCTCTCAGATCATCCACCACGTCTTCACCTACAAGTGTCTTGCACCAGTTGCCCCGTGGTTCTGCATCTGAAACCAGCTTCATTAGTACCTAG 1167 0.5201 MEFHLKQWKNHHDSESEDQHFAKMPRLMLESHLHSSSPSSPALPLFLPELNSKVSSLSSLSDSSISPAPRFPRMGSYFSLAQWQELELQALIFRYMLAGAAVPPDLLLPIKKSLLHSASYFLHYQPSMLQTGYWSGAPMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHVHRGRNRSRKPVEVPTPATAVGVGSATAGTGVGCPSATTASVSALHMTPTALRSPFDLPQLNRCSSGIIKNEKESVFENQSRDNVDGEGRSDGHILRHFFDDWPRSLQEPDNAESKAGSISSATCLSISMPGKASSSDVSLKLSTGDDAEDRCPRSGNVGPQNLQLNWAGGWASSANHVASMGGPLAEALRSSTTSSPTSVLHQLPRGSASETSFIST 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02344 388 Pfam WRC 141 183 IPR014977 -
Accr2g02344 388 ProSiteProfiles QLQ domain profile. 77 112 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr2g02344 388 MobiDBLite consensus disorder prediction 301 331 - -
Accr2g02344 388 ProSiteProfiles WRC domain profile. 140 184 IPR014977 -
Accr2g02344 388 Pfam QLQ 78 110 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr2g02344 388 MobiDBLite consensus disorder prediction 359 388 - -
Accr2g02344 388 PANTHER GROWTH-REGULATING FACTOR 5 49 306 IPR031137 GO:0005634|GO:0006351|GO:0032502
Accr2g02344 388 SMART QLQ_2 76 112 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02344 Accr-Chr2 58753754 58755675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02344 1 375 GRF Transcription Factor Family AT3G52910 47.826 4.11e-89 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Accr2g02344 WRC 9.5e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02344 - - qlo:115953466 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02344 2 58753754 58755675 Accr5g02190 5 48095693 48097622 CCT
Accr2g02344 2 58753754 58755675 Accr2g02344 2 58753754 58755675 ECH