Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02334 ATGGACATGGATAGCTCGCGTAGACCGTTTGATAGATCGAGAGAGCCGGCTATCAAGAAACCCCGACTGACCGACGAGCTCGAGCGTGGCCCGAATTCCAGTCTACGACCGTTTCCTCAGCGACAAGTGGCTTCTGGAGTTAATTCATTGGCCCAGTCAAGGTTTAGGACAAATGACAGAGATTCCGAGAGCAGTGAGTCTGGTCGTGGTGGATACCAGCCCCAACCGCTCCACCAAGAGCTTGTCCATCAGTACAAAACCGCACTTGCTGAGCTAACATTCAATTCTAAACCGATAATTACCAACCTGACTATAATTGCAGGCGAGAATCTTTATGCCGCGAAGGCTATTGCTGCCACTGTTTGTGCTAACATTCTAGAGGTTCCTACTGAACAAAAGCTGCCGTCTCTTTATCTTTTAGACAGTATTGTTAAGAATATTGGGCGGGACTACATAAAATACTTTGCTGTTAGACTACCTGAGGTATTCTGCAACGCATACAGACAGGTTGATTCTTCTGTCCATTCAAGTATGAGGCACCTTTTTGGAACTTGGAAAGGAGTCTTTCCTCCCCAGACCCTCCAGATGATTGAGAAGGAGCTTGGCTTCACTCCTGCTGTCAATGGTTCATCTTCTGCATCTACACTGAGGAGTGATTCGCAGTCACAACGACCACAGCATAGCATCCACGTGAATCCTAAATATTTGGAGAGGCAGCGTCAGTCTGGCAGGAACATTCAAGGCTCTAATAGAGATTCATATAGTGACTCTGTTCCTGAAAAGGGCATTGATACATCCTATGGAGGCAATGAATATGGTTCTGAACTTTCAAGGAATTCAAGTTTGGGTATTGGAAGAGCTGGTGGCAGGACCTCTGAGTTAGCACGCGACAAAGCTTGGTACAAAGCAGGCAGCAATGCTGCGGACATTATGCCTGTCCAAAGGAATGGTTTCAGTCTCAAGCGTAGCTCATCAAATCATGAAGCACCAAAGTCCATCAACTTGGATGAACATAATCAACCAACACAAAGCTTAACTAGCATAAAGAGTAGAGTCTTGTCGAGTAGTTGGAAAAATTCTGAGGAAGAGGAGTACATGTGGGATGAGGTGAACGCAGGACTTACTGAGCATGGTGCATCTAATGTCTCTAGCAACTTGAGCAAAGATTGTTGGACTGCTGATGATGACAATTCTGCTGTTGAAGGTCACCTCCAAAGCACAATCCGTGAAGATAGAGATGTATCCACTGAAATGAAACACCTACCTGCTTTTGGTCATCGGCCATCATTATCTTGGAAATCACAGCAGCAGCCATTTGATGAGCTGAATCATAGGCCATGTTCTTCAGAAGGCATTGGATCCACTCTTGGTAGGTTGCCAAACATTATGAGTTCCTCTAATGTCAAAATGGGAAATCGGCCCTTCTTGTCAAATGCCACATTAGGAACAGCAGGAACGTTGCAACAACAGCAATTTCATTCCATGGGAGCAGAGTCTCCTTCTTTGCAGTCGCCTTTTCGACAACGGTCTCCATCACCACCAGTTAGTGTGCACCATCCTCGTCAAATGCGGGTTTTGGCGGAGCAAGACCATCCACAGACTCTTAAAATGTCTCAATTTTCAGGACGTTTACGGAGCAAAGATCTTCAAGATTCATCATCTGTCCTTCTACATCCACATACTGTTCAGGTTGGTAACTCACAGCGATCACATCAAAAGGACTTGCAGGGTCCATTGCCTTCAGTGTCTACTTTCCAGCCAAGGCATCACAATGCAGCTTCACAACCACAGCATCTTGGTTCTAATACTGAAGTGTCTGACCTGAAGGAAAAGATTGCCCACTCTAAAGAAACTTCAGAGCAGTCAACTACTAGTACTATGTTAGCTGCAGTTATGAAGAGTGGGATTTTCTCCAGTGGTCAGCCTGGTACAAGTTTCTTGGACAGAAGGAACCTTCCATTGAAATCAGGGGTTCAGCCTACCCAGCCAAGTGGATCATCTCCTACAACATCAGTTTCTTCAGGGCCTGGGGTTGCATCTCCATCTCAATTAGGTCCTTCTAATGATGACTCATCTACTCTGCCAAAAGAATCTCGAGGAAAGGTTGGAGCCCCATCAAGGCTGCCTGCTCTACCACCAGCTTCCTCTACTGTGAGTAGAGCCTCAGCCAAGACCTCCAATGTCACTCATAATAAATCTAATCCAGTTTCAAACCTTTTAAACTCGTTGGTTGCAAAGGGTTTGATATCTGCAAAAATAGATCCAGCTACTGAGGTGCCAGCTGAGGTGCTGAATCGATTGGAAGATCAGAGCCAAAGCATCACCACCAGTAGTACTTTGCCAGCTGTTTCAGTTACTGATTCTGTAACTGTTCCTGTTTTATCTACCGGAGATGATCAACTTGCAAAAGGTTCCTTGAGTCAATCAAATCCCACGGAAATAAAAAATCTAATTGGCTTTGAGTTTAAGCCCAGTGTGATCCGGGAATTTCATTCACCTGTGATCAGAGAACTATTCTATGATTCCCCTCATCATTGCAGCATTTGTGGCCTTAGGCTTAAACATCAAGAACAATTGAATAGACACTTGGAGTGTCATGCTAGAAGAGAAAGAGAACAAAGTGATGTACTGAAGGCCTCTAGGAGATGGTATTTGAGGTCAAGTGACTGGGTTGTTGGCGAGGATGAAATTTCATCTGAGTATGAGAGTATTGATTCCATAGAGTTACATGGCAATACATCGGAAAGAAGTGAAGAGGATGCCAAGGTTCCATCTGATGAAGATCAGTGCTTATGTTTGCTGTGTGGTGAGTTGTTCGAAGATGTTTATTGTCAAGAAAGGGATGAGTGGATGTTCAAAGGGGCAGTTTACCTACCTGTCTCCAGTAATGATAGCGAGATATATATTAACGTCAGTAGTAAAAGGGGTCCCATTGTTCACAGTTGGTGCTTAACGGAGAGCTCCATCTCTAGCGCCCCTACAAGGGAACAGGAGTAG 2997 0.4491 MDMDSSRRPFDRSREPAIKKPRLTDELERGPNSSLRPFPQRQVASGVNSLAQSRFRTNDRDSESSESGRGGYQPQPLHQELVHQYKTALAELTFNSKPIITNLTIIAGENLYAAKAIAATVCANILEVPTEQKLPSLYLLDSIVKNIGRDYIKYFAVRLPEVFCNAYRQVDSSVHSSMRHLFGTWKGVFPPQTLQMIEKELGFTPAVNGSSSASTLRSDSQSQRPQHSIHVNPKYLERQRQSGRNIQGSNRDSYSDSVPEKGIDTSYGGNEYGSELSRNSSLGIGRAGGRTSELARDKAWYKAGSNAADIMPVQRNGFSLKRSSSNHEAPKSINLDEHNQPTQSLTSIKSRVLSSSWKNSEEEEYMWDEVNAGLTEHGASNVSSNLSKDCWTADDDNSAVEGHLQSTIREDRDVSTEMKHLPAFGHRPSLSWKSQQQPFDELNHRPCSSEGIGSTLGRLPNIMSSSNVKMGNRPFLSNATLGTAGTLQQQQFHSMGAESPSLQSPFRQRSPSPPVSVHHPRQMRVLAEQDHPQTLKMSQFSGRLRSKDLQDSSSVLLHPHTVQVGNSQRSHQKDLQGPLPSVSTFQPRHHNAASQPQHLGSNTEVSDLKEKIAHSKETSEQSTTSTMLAAVMKSGIFSSGQPGTSFLDRRNLPLKSGVQPTQPSGSSPTTSVSSGPGVASPSQLGPSNDDSSTLPKESRGKVGAPSRLPALPPASSTVSRASAKTSNVTHNKSNPVSNLLNSLVAKGLISAKIDPATEVPAEVLNRLEDQSQSITTSSTLPAVSVTDSVTVPVLSTGDDQLAKGSLSQSNPTEIKNLIGFEFKPSVIREFHSPVIRELFYDSPHHCSICGLRLKHQEQLNRHLECHARREREQSDVLKASRRWYLRSSDWVVGEDEISSEYESIDSIELHGNTSERSEEDAKVPSDEDQCLCLLCGELFEDVYCQERDEWMFKGAVYLPVSSNDSEIYINVSSKRGPIVHSWCLTESSISSAPTREQE 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02334 998 MobiDBLite consensus disorder prediction 270 286 - -
Accr2g02334 998 MobiDBLite consensus disorder prediction 489 511 - -
Accr2g02334 998 MobiDBLite consensus disorder prediction 655 693 - -
Accr2g02334 998 MobiDBLite consensus disorder prediction 35 55 - -
Accr2g02334 998 ProSitePatterns Zinc finger C2H2 type domain signature. 846 866 IPR013087 -
Accr2g02334 998 ProSiteProfiles CID domain profile. 77 205 IPR006569 -
Accr2g02334 998 MobiDBLite consensus disorder prediction 1 29 - -
Accr2g02334 998 MobiDBLite consensus disorder prediction 489 519 - -
Accr2g02334 998 SUPERFAMILY ENTH/VHS domain 79 206 IPR008942 -
Accr2g02334 998 ProSiteProfiles Zinc finger C2H2 type domain profile. 844 871 IPR013087 -
Accr2g02334 998 MobiDBLite consensus disorder prediction 1 76 - -
Accr2g02334 998 MobiDBLite consensus disorder prediction 238 260 - -
Accr2g02334 998 MobiDBLite consensus disorder prediction 320 346 - -
Accr2g02334 998 CDD CID_Pcf11 82 194 IPR047415 -
Accr2g02334 998 SMART 558neu5 80 202 IPR006569 -
Accr2g02334 998 Gene3D - 74 202 IPR008942 -
Accr2g02334 998 MobiDBLite consensus disorder prediction 208 229 - -
Accr2g02334 998 MobiDBLite consensus disorder prediction 208 288 - -
Accr2g02334 998 FunFam polyadenylation and cleavage factor homolog 4 74 202 - -
Accr2g02334 998 Pfam CID domain 86 196 IPR006569 -
Accr2g02334 998 MobiDBLite consensus disorder prediction 712 736 - -
Accr2g02334 998 MobiDBLite consensus disorder prediction 563 602 - -
Accr2g02334 998 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 39 992 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Accr2g02334 998 MobiDBLite consensus disorder prediction 638 736 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02334 Accr-Chr2 58619308 58626183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02334 801 988 C2H2 Transcription Factor Family AT4G04885 34.896 1.50e-30 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02334 K14400 - gmx:100788958 920.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02334 2 58619308 58626183 Accr2g02334 2 58619308 58626183 ECH