Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02332 ATGAACCCGAACGACGAAGGTCAACCAAATTCTCCGAAGAGTTCGAAGGGTAAAGCTTCGGAGCAGGAAACATATGGGTTCTCTCCAATGGAATTAAGTTCTGGAGCGTTCGGAGATGCCTTAGCTAGTCTGTCAATGGCGGACATTGCCCTCTCTGGCCATCCTCCTTCATCTTTGTATGATTCTCCTTTCATGGAGTTTAGAGCATTCTCAACCATGAGCCCGACGTCTCTGGCTTCGCCGCCTCCTGCTGCTCCTGTTAGTGATGAGAGAGCTCCTTCGGTACCAACAACTATTAAGGAGGAAGCTGGAGGTGAGTTTGAGGACGTGGATTTGCCACACCCGCTTGAGTGTTTACAGGAGAATCCGATTCCGCCATTTCTATGGAAAACTTACGATCTGGTGGATGATCCGTCTCTGAATCCGATCATATCATGGGGCTCGGCCGGTGCTAGTTTCGTGGTATGGGACCCTGTGGAATTTGCTAGGATCGTCTTGCCAAGGAATTTCAAGCATAACAATTTCTCCAGTTTTGTCCGCCAGCTAAATACTTATGGGTTCCGCAAGATTGACCCTGATAAGTGGGAGTTTGCGAATGAAGGTTTCAAGCAAGGGAAGAGACATCTATTGAAGAACATACAAAGGCGCAGATCACTGCAATCCCAGCATGCTGGTAATCTTGGGCCATCCACTGAAGCAGGAAAGTCTGGAGTTGAGGTCGAGATAGAAAGACTGAGAAAGCAGAGAAGTATACTAGTCCAAGATTTGGTTGATTTGCAGCAACAACAGAGAAGGACTGTTCATCAGGCGGGACAAGTGAGCCAGAGGCTTGAATCTGCAGAGCAGAGACAGAGACAAATGGTTTCTTTCTTGGCCAAGTTATTTCAAAATCCAGCATTTTTAGCCCGCCTGAGGCAACAAAAGGAACAGGCAGGTATAGATTCCCCAAGAGTGAGAAGGAAGTTTGTCAAGCAGCACCAACATGAAACAGGAACATCAGAATCTTTGAATGAAGGGCAGATTGTAAAATACCAACCGGATTGGACAGACATTACCAACCCTTCAGAAACACCAGTACCAAATCCAATTTCTACTGAACAGTCTCCCGAGTACCCTTCACATGGTTGGGCAAGAGAACTTGGTTCAGTGGCAGAAAATCCTTATGTACAAGCTGATGTTGTATCAGATGAATTGGCTGCAACTAGTGAAATAATGACAACTCCAGAGATTATTGGGGAAGGATCGTCAAACTTACGGCTTGAAGATCCTCTTTGGAAAGGGAAAAACGTCATGAGGCCTGATCAAGAAGTTATACCAGAGGATCTGACCAGGGAAATGTTTTACCCGCCTGAAACTGAAAGCGTTATTAAACAAGATGTATGGAACCCGGGCTTTAATGTTAGCGGTGCTACTTCTTGCTCTGTGAGTGAGCTCTGGGACAGTCCAATTCCAACCAATTATGAAGTGCCAGAGTTTGGAGTCGCAGGTGGCTTATCAGACCTCTGGGATATAAGCTATATGCAAGAAACAGATAAGTGGCCAACTGATGAGTTCCCTCCAAATGAAACAGAAGGTCAGGCTGATCGCCCAAAAGATGATAGATCTAAGAATGTTGATCCATAG 1623 0.459 MNPNDEGQPNSPKSSKGKASEQETYGFSPMELSSGAFGDALASLSMADIALSGHPPSSLYDSPFMEFRAFSTMSPTSLASPPPAAPVSDERAPSVPTTIKEEAGGEFEDVDLPHPLECLQENPIPPFLWKTYDLVDDPSLNPIISWGSAGASFVVWDPVEFARIVLPRNFKHNNFSSFVRQLNTYGFRKIDPDKWEFANEGFKQGKRHLLKNIQRRRSLQSQHAGNLGPSTEAGKSGVEVEIERLRKQRSILVQDLVDLQQQQRRTVHQAGQVSQRLESAEQRQRQMVSFLAKLFQNPAFLARLRQQKEQAGIDSPRVRRKFVKQHQHETGTSESLNEGQIVKYQPDWTDITNPSETPVPNPISTEQSPEYPSHGWARELGSVAENPYVQADVVSDELAATSEIMTTPEIIGEGSSNLRLEDPLWKGKNVMRPDQEVIPEDLTREMFYPPETESVIKQDVWNPGFNVSGATSCSVSELWDSPIPTNYEVPEFGVAGGLSDLWDISYMQETDKWPTDEFPPNETEGQADRPKDDRSKNVDP 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02332 540 MobiDBLite consensus disorder prediction 510 540 - -
Accr2g02332 540 Gene3D - 119 217 IPR036388 -
Accr2g02332 540 SUPERFAMILY "Winged helix" DNA-binding domain 123 216 IPR036390 -
Accr2g02332 540 Pfam HSF-type DNA-binding 127 216 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr2g02332 540 Coils Coil 242 262 - -
Accr2g02332 540 PRINTS Heat shock factor (HSF) domain signature 127 150 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr2g02332 540 PRINTS Heat shock factor (HSF) domain signature 178 190 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr2g02332 540 PRINTS Heat shock factor (HSF) domain signature 165 177 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr2g02332 540 MobiDBLite consensus disorder prediction 1 32 - -
Accr2g02332 540 MobiDBLite consensus disorder prediction 1 29 - -
Accr2g02332 540 MobiDBLite consensus disorder prediction 347 372 - -
Accr2g02332 540 SMART hsfneu3 123 216 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr2g02332 540 FunFam Heat shock transcription factor 1 120 217 - -
Accr2g02332 540 ProSitePatterns HSF-type DNA-binding domain signature. 166 190 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr2g02332 540 MobiDBLite consensus disorder prediction 515 540 - -
Accr2g02332 540 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 113 351 IPR027725 -
Accr2g02332 540 MobiDBLite consensus disorder prediction 347 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02332 Accr-Chr2 58609607 58611925 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02332 73 515 HSF AT5G03720 44.035 4.42e-98 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Accr2g02332 HSF_DNA-bind 9.9e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02332 K09419 - qsa:O6P43_005885 549.666