Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02277 ATGAAGCAAGAATTGGAATCGGAGATTGCTCTGGAGATTCAGTCTCTGAATAAAGATGATGAAGTCGTTCCTTCTCCACCTTCTGAAATTGACGCTGGTTCAGAGTCTGAGTTGATATCTTCTTTGCATGTTTGTGAGAATCCCGGCGGTATTGTTAAAAGTTCCGTTGTAAATGGTCATCTTGTTTATACTCGAACAAAGAAATCTCGGCATTTGTGCAGTGGGTCTTCTGAGAATGGTTCGCTTAAGAGACTCAAGACCTCTGAAGATCGGGAGCCAAATGCAGACCTTCCAGCTGTTGGTGGCGGAGATGATGTACAGCTAAACAATGTAGAAGAAAATATCGAATCTGAAGTCGTTTGCCATTTGGAAAAGCCAGTTAGGTGTACTGAATTGAAGAACGAGCCCGTGCAGTTCCTTGCTGGGGAAGGTGGCTCCAATAAGGTTCTTAATGTAGATAAAACAGTGAAGCGGTTTACGCGATCAGCCTTGAAACCAAAGGTTGAATACAGCGATGAGACGAGGACTGCTCCAGAAGCTGCTCGAACAGAAAATAATAGATCAGTTGAGAAAGAGACCGCTGCTCTAAGTGCCTCAACAACTCGGCGAAATAAGTTGGAACTGAAAATGTCCAAGAAGATCGTGCTCAGCAAGAAGCCTATGACTGTCAAGGAACTATTCGATACTGGTTTACTGGATGGGGTTTCAGTAGTTTATATGGGCGGCAAGGCTTCTGGCCTGCGGGGTGTTATTACAGATGGAGGGATCTTGTGCTCTTGTTGTCTGTGCAATGGGCGCAAGGTTATTCCACCTTCCCAATTCGAGATTCATGCTCGCAAATCATATAAGCGGGCAGCACAGTATATTTGCTTTGAAAACGGAAAGAGCCTGCTTGAATTATTGAGAGCATGCAGAGGAACTTCGCTGCCTTCATTGGAGACGGCAATTCAAAACTTTGTTTGTTCTCCACCTCAAGATAAATATTTTACATGTAAAAGGTGCAAAGGATGTTTTTCCTCTTCACGGGCGGAAAAAGTAGGGCCTATATGTAAAGCTTGTTTGGAATCAAAGGAATGCGAAGGCAGTTTAATTGACGCAGTTGGCAAAAGAGTCAGGTCTCCCAGACAAGTTCCAACCTCCAAACTATTAACTGATTCTGAGCTGTGTAACTCGTCACAAACTAACAAACATTGGAAGAAAAGGACAAGGAGAACAAATCGGGTTAACTGCTCAAAGTCTTCCGAGACTGCTTCTGTGCCCATCCTATCACAAAAGAAGCCTCTGCAGAGGTTGAAGAAGAAATCTGTGCCAACAAAAACTTCAGTAAGACTGAAGACCCCACTAATTTCATCAAACTCAGTGTGTTTTTCTTCACAAAATAAGAGTCAATGGAAGATAACTAAAAAGGATCAGCGGTTACATAAATTAGTTTTTGAAGAAGGTGGATTGCCTGATGGAACAGAAGTGGCTTATTATGGACGTGGACAGAAATTGCTCGAGGGTTACAAAAAGGGCTTTGGAATTCTTTGTCGGTGCTGCAACACAGAGGTCAGCCCATCGCAATTTGAGGTCCATGCAGGCTGGGCTTCTCGCAGGAAACCTTATGCATACATCTACACTTCAAATGGGGTTTCTCTCCATGAATTAGCAATTTCTCTTTCAAAAGGCCGCAAGTACTCTTCAAAGGACAATGATGATCTTTGCGTTATTTGTTGGGATGGTGGAAATTTGTTGCTTTGTGATGGATGCCCAAGGGCATTCCATAAAGAATGCGCATCTCTATCAAGCATTCCACGTGGTGACTGGTACTGTAAGTTTTGCCAAAACATGTTCCAGAGGGAGAAATTTGTAGCACACAATGCGAATGCTGTGGCTGCTGGAAGGATTGACGGGGTTGATCCTATTGAACAGATAACCAAGAGATGCATTCGCATTGTCAAAGACATTGAAGCTGAGCTGAGCGGCTGTGCTTTATGCAGGGGTTATGACTTCAGCAAGTCAGGATTTGGTCCTCGCACAATTATAATCTGCGACCAGTGTGAAAAGGAATATCATGTGGGCTGTTTGAGGGATCATAAGATGGCATATTTGAAGGAATTGCCAGAAGGAAATTGGTTTTGTTGCACAGATTGCAACAGAATACATTCTACTCTGCAGAAGTTCTTGATCAGGGGGACCGAGAAACTTCCTGACTCTCTTGTGGATGTTATTAAGACAAAACAAGAGGAAAACGGTTTGCAGTCTTTCAATGATATTGATGTAAGATGGAGGCTTCTTAATGGCAAAATTGCTTCTCCTGAGACCAGGCCATTGCTGTCAGATGTTGTTTCAATCTTTCATGAATGCTTTGATCCTATAGTTGATTCAACTTGTGGACGTGACCTTATCCCAGCCATGGTTTATGGAAGGAATGTGCGGAGTCAAGAGTTTGGAGGAATGTATTGCGCAATATTATTGGTCAATTCAACTGTTGTATCAGCTGGCATGCTTCGAATTTTTGGTAAAGATGTGGCCGAACTTCCTTTAGTTGCAACAAGCAATGGTAATCATGGAAAGGGCTACTTCCAATTACTCTTCACATGCATTCAGAGACTGCTGGCGCTGTTGAACGTGAAAATGCTTGTGCTACCAGCTGCTGAAGAAGCAGAATCCATATGGACAGATAAATTTGGGTTCCACAAGATGAAACCAGAGCAGATTAGCAACTGCAGAAAGAACTACAGTCAGATGGTGACATTCCAAGGGACATCCATGCTTCAAAAATGGTTCGGCCCTCTCACTTCTTCAATGTGA 2793 0.4314 MKQELESEIALEIQSLNKDDEVVPSPPSEIDAGSESELISSLHVCENPGGIVKSSVVNGHLVYTRTKKSRHLCSGSSENGSLKRLKTSEDREPNADLPAVGGGDDVQLNNVEENIESEVVCHLEKPVRCTELKNEPVQFLAGEGGSNKVLNVDKTVKRFTRSALKPKVEYSDETRTAPEAARTENNRSVEKETAALSASTTRRNKLELKMSKKIVLSKKPMTVKELFDTGLLDGVSVVYMGGKASGLRGVITDGGILCSCCLCNGRKVIPPSQFEIHARKSYKRAAQYICFENGKSLLELLRACRGTSLPSLETAIQNFVCSPPQDKYFTCKRCKGCFSSSRAEKVGPICKACLESKECEGSLIDAVGKRVRSPRQVPTSKLLTDSELCNSSQTNKHWKKRTRRTNRVNCSKSSETASVPILSQKKPLQRLKKKSVPTKTSVRLKTPLISSNSVCFSSQNKSQWKITKKDQRLHKLVFEEGGLPDGTEVAYYGRGQKLLEGYKKGFGILCRCCNTEVSPSQFEVHAGWASRRKPYAYIYTSNGVSLHELAISLSKGRKYSSKDNDDLCVICWDGGNLLLCDGCPRAFHKECASLSSIPRGDWYCKFCQNMFQREKFVAHNANAVAAGRIDGVDPIEQITKRCIRIVKDIEAELSGCALCRGYDFSKSGFGPRTIIICDQCEKEYHVGCLRDHKMAYLKELPEGNWFCCTDCNRIHSTLQKFLIRGTEKLPDSLVDVIKTKQEENGLQSFNDIDVRWRLLNGKIASPETRPLLSDVVSIFHECFDPIVDSTCGRDLIPAMVYGRNVRSQEFGGMYCAILLVNSTVVSAGMLRIFGKDVAELPLVATSNGNHGKGYFQLLFTCIQRLLALLNVKMLVLPAAEEAESIWTDKFGFHKMKPEQISNCRKNYSQMVTFQGTSMLQKWFGPLTSSM 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02277 930 ProSiteProfiles Zinc finger PHD-type profile. 565 610 IPR019787 -
Accr2g02277 930 MobiDBLite consensus disorder prediction 169 202 - -
Accr2g02277 930 ProSitePatterns Zinc finger PHD-type signature. 568 607 IPR019786 -
Accr2g02277 930 SMART PHD_3 567 608 IPR001965 -
Accr2g02277 930 SMART PHD_3 655 712 IPR001965 -
Accr2g02277 930 MobiDBLite consensus disorder prediction 72 105 - -
Accr2g02277 930 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 652 714 - -
Accr2g02277 930 CDD PHD1_AIRE 567 607 - -
Accr2g02277 930 SUPERFAMILY FYVE/PHD zinc finger 554 609 IPR011011 -
Accr2g02277 930 SUPERFAMILY FYVE/PHD zinc finger 647 711 IPR011011 -
Accr2g02277 930 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 652 714 IPR013083 -
Accr2g02277 930 Pfam Tify domain binding domain 249 304 IPR032308 -
Accr2g02277 930 Pfam Tify domain binding domain 501 551 IPR032308 -
Accr2g02277 930 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 554 631 - -
Accr2g02277 930 PANTHER AUTOIMMUNE REGULATOR 110 921 - -
Accr2g02277 930 MobiDBLite consensus disorder prediction 169 189 - -
Accr2g02277 930 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 554 641 IPR013083 -
Accr2g02277 930 Pfam PHD-finger 568 609 IPR019787 -
Accr2g02277 930 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 806 897 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02277 Accr-Chr2 57760380 57767834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02277 52 921 PHD Transcription Factor Family AT2G36720 47.564 0.0 804
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Accr2g02277 TDBD 6.4e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02277 - - pcin:129313599 1524.61